RNA id: TU414645


Basic Information

Item Value
RNA id TU414645
length 209
lncRNA type inter_gene
GC content 0.43
exon number 2
gene id G363528
representative True

Chromosome Information

Item Value
chromosome id CI01000158
NCBI id null
chromosome length 1938735
location 1211903 ~ 1212244 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CAAAGTTGACCAGTCTCACAGCTCACATATTTATGTAATGCACAAACAATTAAAGGTTTTGGTTTATGGAAGGGTGTCAACTTAATCAACATCCCTGTCGGCTCATAATAAAAGTTCATCTTAACTCGATTGGGTCCACAGACTGGAGCGCAGGCTGTCGCTCTGCAGTATAACTGGAGTGTCGGAAGAAGAATGCAGTTGTCTTGTCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU414569 lncRNA upstream 147597 1064025 ~ 1064306 (+) True G363454
TU414568 lncRNA upstream 149535 1062160 ~ 1062368 (+) True G363453
TU414564 lncRNA upstream 153659 1058022 ~ 1058244 (+) True G363449
TU414563 lncRNA upstream 155048 1056644 ~ 1056855 (+) True G363448
TU414497 lncRNA upstream 189428 1021530 ~ 1022475 (+) True G363384
TU414648 lncRNA downstream 34810 1247054 ~ 1247303 (+) True G363531
TU414657 lncRNA downstream 41163 1253407 ~ 1253642 (+) True G363539
TU414504 lncRNA downstream 214909 1427153 ~ 1447839 (+) True G363391
TU414503 lncRNA downstream 236057 1448301 ~ 1451463 (+) True G363390
TU414489 lncRNA downstream 240016 1452260 ~ 1453741 (+) True G363378
CI01000158_00983889_00993672.mRNA mRNA upstream 217849 983889 ~ 994054 (+) True CI01000158_00983889_00993672
CI01000158_00955930_00956923.mRNA mRNA upstream 254138 955090 ~ 957765 (+) True CI01000158_00955930_00956923
CI01000158_00923138_00936354.mRNA mRNA upstream 274112 923138 ~ 937791 (+) True CI01000158_00923138_00936354
CI01000158_00885015_00891759.mRNA mRNA upstream 319664 885015 ~ 892239 (+) True CI01000158_00885015_00891759
CI01000158_00878419_00882435.mRNA mRNA upstream 329468 878108 ~ 882435 (+) True CI01000158_00878419_00882435
CI01000158_01216424_01216750.mRNA mRNA downstream 3519 1215763 ~ 1217237 (+) True CI01000158_01216424_01216750
CI01000158_01221423_01241226.mRNA mRNA downstream 9179 1221423 ~ 1241431 (+) True CI01000158_01221423_01241226
CI01000158_01271157_01297723.mRNA mRNA downstream 58913 1271157 ~ 1298361 (+) True CI01000158_01271157_01297723
CI01000158_01309383_01335186.mRNA mRNA downstream 97139 1309383 ~ 1335400 (+) True CI01000158_01309383_01335186
CI01000158_01392749_01393057.mRNA mRNA downstream 180505 1392749 ~ 1393285 (+) True CI01000158_01392749_01393057
TU414795 other downstream 475723 1687967 ~ 1688784 (+) True CI01000158_01687966_01688623

Expression Profile