Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000189_03624163_03629420.mRNA |
| length | 1008 |
| RNA type | mRNA |
| GC content | 0.37 |
| exon number | 6 |
| gene id | CI01000189_03624163_03629420 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000189 |
| NCBI id | null |
| chromosome length | 4726117 |
| location | 3624163 ~ 3630008 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0035519 | protein K29-linked ubiquitination | biological_process |
| id | description |
|---|---|
| K06689 | UBE2D, UBC4, UBC5; ubiquitin-conjugating enzyme E2 D |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU436135 | lncRNA | upstream | 94044 | 3525757 ~ 3530119 (+) | True | G381490 |
| TU436083 | lncRNA | upstream | 129821 | 3493644 ~ 3494342 (+) | True | G381455 |
| TU436007 | lncRNA | upstream | 389481 | 3231026 ~ 3234682 (+) | True | G381392 |
| TU435947 | lncRNA | upstream | 509244 | 3112727 ~ 3114919 (+) | True | G381334 |
| TU435962 | lncRNA | upstream | 531869 | 3090189 ~ 3092294 (+) | True | G381349 |
| TU436113 | lncRNA | downstream | 69211 | 3699219 ~ 3707304 (+) | True | G381478 |
| TU436197 | lncRNA | downstream | 82155 | 3712163 ~ 3712627 (+) | True | CI01000189_03713203_03738458 |
| TU436205 | lncRNA | downstream | 113305 | 3743313 ~ 3743744 (+) | True | G381558 |
| TU436203 | lncRNA | downstream | 116792 | 3746800 ~ 3751955 (+) | True | G381556 |
| TU436207 | lncRNA | downstream | 127931 | 3757939 ~ 3782973 (+) | True | G381560 |
| CI01000189_03617026_03619754.mRNA | mRNA | upstream | 4358 | 3617026 ~ 3619805 (+) | True | CI01000189_03617026_03619754 |
| CI01000189_03573515_03603610.mRNA | mRNA | upstream | 20359 | 3572191 ~ 3603804 (+) | True | CI01000189_03573515_03603610 |
| CI01000189_03559325_03563414.mRNA | mRNA | upstream | 60559 | 3559325 ~ 3563604 (+) | True | CI01000189_03559325_03563414 |
| CI01000189_03504269_03505449.mRNA | mRNA | upstream | 118618 | 3504269 ~ 3505545 (+) | True | CI01000189_03504269_03505449 |
| CI01000189_03485572_03492384.mRNA | mRNA | upstream | 131779 | 3485572 ~ 3492384 (+) | True | CI01000189_03485572_03492384 |
| CI01000189_03631130_03666137.mRNA | mRNA | downstream | 1078 | 3631086 ~ 3666281 (+) | True | CI01000189_03631130_03666137 |
| CI01000189_03675388_03679269.mRNA | mRNA | downstream | 45380 | 3675388 ~ 3679499 (+) | True | CI01000189_03675388_03679269 |
| CI01000189_03687102_03695400.mRNA | mRNA | downstream | 55650 | 3685658 ~ 3695405 (+) | True | CI01000189_03687102_03695400 |
| CI01000189_03713203_03738458.mRNA | mRNA | downstream | 82510 | 3712518 ~ 3738497 (+) | False | CI01000189_03713203_03738458 |
| CI01000189_03767615_03770164.mRNA | mRNA | downstream | 136847 | 3766855 ~ 3770400 (+) | True | CI01000189_03767615_03770164 |
| TU435687 | other | upstream | 783038 | 2839221 ~ 2841125 (+) | True | G381120 |
| TU434037 | other | upstream | 2564778 | 1016031 ~ 1059385 (+) | True | CI01000189_00987665_01058757 |
| TU434221 | other | upstream | 2611260 | 1012546 ~ 1012903 (+) | False | G379799 |
| TU434222 | other | upstream | 2611329 | 1012546 ~ 1012834 (+) | True | G379799 |
| TU433965 | other | upstream | 3127255 | 475615 ~ 496908 (+) | True | G379600 |
| TU436323 | other | downstream | 490379 | 4120387 ~ 4122344 (+) | True | G381655 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00023789 | False | 878 | mRNA | 0.41 | 7 | NC_007128.7 | 21051022 ~ 21057674 (-) |
