Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000189_03573515_03603610.mRNA |
| length | 6474 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 10 |
| gene id | CI01000189_03573515_03603610 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000189 |
| NCBI id | null |
| chromosome length | 4726117 |
| location | 3572191 ~ 3603804 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0007264 | small GTPase mediated signal transduction | biological_process |
| id | description |
|---|---|
| K13709 | ARHGAP5; Rho GTPase-activating protein 5 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU436135 | lncRNA | upstream | 42072 | 3525757 ~ 3530119 (+) | True | G381490 |
| TU436083 | lncRNA | upstream | 77849 | 3493644 ~ 3494342 (+) | True | G381455 |
| TU436007 | lncRNA | upstream | 337509 | 3231026 ~ 3234682 (+) | True | G381392 |
| TU435947 | lncRNA | upstream | 457272 | 3112727 ~ 3114919 (+) | True | G381334 |
| TU435962 | lncRNA | upstream | 479897 | 3090189 ~ 3092294 (+) | True | G381349 |
| TU436113 | lncRNA | downstream | 95415 | 3699219 ~ 3707304 (+) | True | G381478 |
| TU436197 | lncRNA | downstream | 108359 | 3712163 ~ 3712627 (+) | True | CI01000189_03713203_03738458 |
| TU436205 | lncRNA | downstream | 139509 | 3743313 ~ 3743744 (+) | True | G381558 |
| TU436203 | lncRNA | downstream | 142996 | 3746800 ~ 3751955 (+) | True | G381556 |
| TU436207 | lncRNA | downstream | 154135 | 3757939 ~ 3782973 (+) | True | G381560 |
| CI01000189_03559325_03563414.mRNA | mRNA | upstream | 8587 | 3559325 ~ 3563604 (+) | True | CI01000189_03559325_03563414 |
| CI01000189_03504269_03505449.mRNA | mRNA | upstream | 66646 | 3504269 ~ 3505545 (+) | True | CI01000189_03504269_03505449 |
| CI01000189_03485572_03492384.mRNA | mRNA | upstream | 79807 | 3485572 ~ 3492384 (+) | True | CI01000189_03485572_03492384 |
| CI01000189_03479355_03480905.mRNA | mRNA | upstream | 90973 | 3479355 ~ 3481218 (+) | True | CI01000189_03479355_03480905 |
| CI01000189_03344581_03361919.mRNA | mRNA | upstream | 209378 | 3344581 ~ 3362813 (+) | True | CI01000189_03344581_03361919 |
| CI01000189_03617026_03619754.mRNA | mRNA | downstream | 13222 | 3617026 ~ 3619805 (+) | True | CI01000189_03617026_03619754 |
| CI01000189_03624163_03629420.mRNA | mRNA | downstream | 20359 | 3624163 ~ 3630008 (+) | True | CI01000189_03624163_03629420 |
| CI01000189_03631130_03666137.mRNA | mRNA | downstream | 27282 | 3631086 ~ 3666281 (+) | True | CI01000189_03631130_03666137 |
| CI01000189_03675388_03679269.mRNA | mRNA | downstream | 71584 | 3675388 ~ 3679499 (+) | True | CI01000189_03675388_03679269 |
| CI01000189_03687102_03695400.mRNA | mRNA | downstream | 81854 | 3685658 ~ 3695405 (+) | True | CI01000189_03687102_03695400 |
| TU435687 | other | upstream | 731066 | 2839221 ~ 2841125 (+) | True | G381120 |
| TU434037 | other | upstream | 2512806 | 1016031 ~ 1059385 (+) | True | CI01000189_00987665_01058757 |
| TU434221 | other | upstream | 2559288 | 1012546 ~ 1012903 (+) | False | G379799 |
| TU434222 | other | upstream | 2559357 | 1012546 ~ 1012834 (+) | True | G379799 |
| TU433965 | other | upstream | 3075283 | 475615 ~ 496908 (+) | True | G379600 |
| TU436136 | other | downstream | 21932 | 3625736 ~ 3626855 (+) | True | G381491 |
| TU436323 | other | downstream | 516583 | 4120387 ~ 4122344 (+) | True | G381655 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00023000 | True | 7266 | mRNA | 0.43 | 6 | NC_007128.7 | 31742923 ~ 31798265 (+) |
| bowfin (Amia calva) | AMCG00000662 | True | 3771 | mRNA | 0.56 | 1 | CM030141.1 | 21683615 ~ 21687385 (+) |
