Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000304_12385473_12389970.mRNA |
| length | 1154 |
| RNA type | mRNA |
| GC content | 0.39 |
| exon number | 4 |
| gene id | CI01000304_12385473_12389970 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 12385473 ~ 12390527 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU488915 | lncRNA | upstream | 82747 | 12302340 ~ 12302726 (+) | True | G425764 |
| TU488916 | lncRNA | upstream | 84851 | 12300413 ~ 12300622 (+) | True | G425765 |
| TU488779 | lncRNA | upstream | 128279 | 12255099 ~ 12257194 (+) | True | G425666 |
| TU488771 | lncRNA | upstream | 211414 | 12172882 ~ 12174059 (+) | True | G425660 |
| TU488745 | lncRNA | upstream | 269107 | 12111311 ~ 12116366 (+) | True | G425635 |
| TU488929 | lncRNA | downstream | 64654 | 12455181 ~ 12455395 (+) | True | G425777 |
| TU488930 | lncRNA | downstream | 64966 | 12455493 ~ 12455853 (+) | True | G425778 |
| TU488950 | lncRNA | downstream | 170547 | 12561074 ~ 12561425 (+) | True | G425796 |
| TU488876 | lncRNA | downstream | 198394 | 12588921 ~ 12589788 (+) | True | CI01000304_12583384_12588591 |
| TU488972 | lncRNA | downstream | 200729 | 12591256 ~ 12593865 (+) | True | G425812 |
| CI01000304_12375591_12385064.mRNA | mRNA | upstream | 353 | 12375591 ~ 12385120 (+) | True | CI01000304_12375591_12385064 |
| CI01000304_12362738_12374610.mRNA | mRNA | upstream | 10863 | 12362738 ~ 12374610 (+) | True | CI01000304_12362738_12374610 |
| CI01000304_12353305_12359214.mRNA | mRNA | upstream | 25635 | 12353006 ~ 12359838 (+) | True | CI01000304_12353305_12359214 |
| CI01000304_12340979_12347664.mRNA | mRNA | upstream | 37583 | 12339847 ~ 12347890 (+) | True | CI01000304_12340979_12347664 |
| CI01000304_12314575_12337592.mRNA | mRNA | upstream | 47783 | 12314316 ~ 12337690 (+) | True | CI01000304_12314575_12337592 |
| CI01000304_12394477_12400175.mRNA | mRNA | downstream | 2973 | 12393500 ~ 12400315 (+) | True | CI01000304_12394477_12400175 |
| CI01000304_12424217_12429262.mRNA | mRNA | downstream | 32679 | 12423206 ~ 12429408 (+) | False | CI01000304_12424217_12429262 |
| CI01000304_12437868_12439019.mRNA | mRNA | downstream | 47131 | 12437658 ~ 12439019 (+) | False | CI01000304_12437868_12439019 |
| CI01000304_12468041_12473615.mRNA | mRNA | downstream | 77514 | 12468041 ~ 12473708 (+) | True | CI01000304_12468041_12473615 |
| CI01000304_12478136_12484791.mRNA | mRNA | downstream | 87609 | 12478136 ~ 12484978 (+) | True | CI01000304_12478136_12484791 |
| TU487556 | other | upstream | 1829769 | 10555614 ~ 10555704 (+) | True | G424559 |
| TU487195 | other | upstream | 2192578 | 10189315 ~ 10189404 (+) | True | G424251 |
| TU487194 | other | upstream | 2193675 | 10188822 ~ 10189404 (+) | False | G424251 |
| TU487178 | other | upstream | 2258151 | 10120399 ~ 10127322 (+) | True | G424246 |
| TU486746 | other | upstream | 2819900 | 9564605 ~ 9565573 (+) | True | CI01000304_09564068_09565679 |
| TU488854 | other | downstream | 38178 | 12434972 ~ 12439086 (+) | False | CI01000304_12437868_12439019 |
| TU488858 | other | downstream | 38178 | 12436554 ~ 12436605 (+) | True | G425718 |
| TU488852 | other | downstream | 47277 | 12437804 ~ 12439086 (+) | True | CI01000304_12437868_12439019 |
| TU489575 | other | downstream | 1165924 | 13556451 ~ 13573943 (+) | True | G426349 |
| TU489538 | other | downstream | 1939521 | 14330048 ~ 14330886 (+) | True | G426312 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00004184 | True | 922 | mRNA | 0.47 | 3 | NC_007121.7 | 26669177 ~ 26677986 (+) |
