RNA id: TCONS_00019822


Basic Information

Item Value
RNA id TCONS_00019822
length 258
RNA type mRNA
GC content 0.33
exon number 11
gene id XLOC_009955
representative True

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 26113457 ~ 26154566 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CAATGCAAGTTATTTAGACATGGCAAcatttcatttttttcttctggattttttgcacaggcctatttaaaggctgaaaagaaattaaaaaaaaaagaaaaaggcaaaGAAAAcTCCAAATTAACTATTGAAAATCAACTGCTGCTAGCCTGCCTGATTTTACCTTCCCGCATGttgttaaccagaagtgacaaactacaagctttacataggcaaactgaaaaaaaaaGACATAACCTGTTTCAAGGTTTACAgttg

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000183537

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00021944 lncRNA upstream 32741 26074711 ~ 26080716 (+) True XLOC_009954
TCONS_00021943 lncRNA upstream 153299 25958896 ~ 25960158 (+) True XLOC_009949
TCONS_00021718 lncRNA upstream 282381 25830704 ~ 25831076 (+) True XLOC_009948
TCONS_00021942 lncRNA upstream 284699 25814269 ~ 25828758 (+) True XLOC_009947
TCONS_00021941 lncRNA upstream 533630 25552322 ~ 25579827 (+) True XLOC_009943
TCONS_00019826 lncRNA downstream 286784 26441350 ~ 26443895 (+) False XLOC_009957
TCONS_00019827 lncRNA downstream 288738 26443304 ~ 26443895 (+) True XLOC_009957
TCONS_00021719 lncRNA downstream 324597 26479163 ~ 26479660 (+) True XLOC_009958
TCONS_00019830 lncRNA downstream 340190 26494756 ~ 26495893 (+) True XLOC_009959
TCONS_00021945 lncRNA downstream 354819 26509385 ~ 26511109 (+) True XLOC_009960
TCONS_00019821 mRNA upstream 91389 26020886 ~ 26022068 (+) True XLOC_009953
TCONS_00019820 mRNA upstream 94763 26017360 ~ 26018694 (+) True XLOC_009952
TCONS_00019819 mRNA upstream 99606 26012569 ~ 26013851 (+) True XLOC_009951
TCONS_00019818 mRNA upstream 121814 25989943 ~ 25991643 (+) True XLOC_009950
TCONS_00019817 mRNA upstream 298069 25809235 ~ 25815388 (+) False XLOC_009947
TCONS_00019824 mRNA downstream 284952 26439518 ~ 26446321 (+) False XLOC_009957
TCONS_00019825 mRNA downstream 285373 26439939 ~ 26443963 (+) False XLOC_009957
TCONS_00019828 mRNA downstream 295049 26449615 ~ 26488169 (+) False XLOC_009958
TCONS_00019831 mRNA downstream 392586 26547152 ~ 26600624 (+) True XLOC_009962
TCONS_00019832 mRNA downstream 446798 26601364 ~ 26634810 (+) False XLOC_009963
TCONS_00019806 other upstream 771646 25341724 ~ 25341811 (+) True XLOC_009938
TCONS_00019805 other upstream 771914 25341416 ~ 25341543 (+) True XLOC_009937
TCONS_00019801 other upstream 841620 25265799 ~ 25271837 (+) True XLOC_009933
TCONS_00019788 other upstream 1016895 25095483 ~ 25096562 (+) False XLOC_009919
TCONS_00019780 other upstream 1194500 24905556 ~ 24918957 (+) True XLOC_009913
TCONS_00019823 other downstream 257080 26411646 ~ 26411778 (+) True XLOC_009956
TCONS_00019829 other downstream 301644 26456210 ~ 26457614 (+) False XLOC_009958
TCONS_00019834 other downstream 486111 26640677 ~ 26643826 (+) True XLOC_009964
TCONS_00019852 other downstream 1052103 27206669 ~ 27206797 (+) True XLOC_009973
TCONS_00019856 other downstream 1069970 27224536 ~ 27225245 (+) False XLOC_009974