RNA id: TU803914



Basic Information


Item Value
RNA id TU803914
length 337
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G682782
representative True

Chromosome Information


Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 3845362 ~ 3845698 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TTTGAGAATGTTACCTACCAAACTGAATTGTGCCAACTATGTTCGGTCGAGGAGGGATAATGGTAAATCTTAATGCTTCAGCATACCAAGACATTTGGGACAATATGCTTCCAACTTTGGGGAAGGCCCTTTTCTATTCCAGCATGACTGTGCCCAGTGCACAAAGCAAGGTCCATAAAGAACTGGAACGGAGATTGCGAGGCAGGCCTTCTCATCCAACATCAGTGCCTGACCTCACAAATCCTCTATGGATGAATGGGCAAAAATTCCCAGAAGCACTCAAAAATCTTGTGGAAAGCCTTCACAGAAGAGTGGAAACTATAGCTGAAAAGGGGGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU803913 lncRNA downstream 179 3844911 ~ 3845183 (-) True G682781
TU803874 lncRNA downstream 182210 3662735 ~ 3663152 (-) True G682743
TU803870 lncRNA downstream 186252 3658877 ~ 3659110 (-) True G682739
TU803864 lncRNA downstream 193151 3651714 ~ 3652211 (-) True G682733
TU803863 lncRNA downstream 193655 3651362 ~ 3651707 (-) True G682732
TU803915 lncRNA upstream 3103 3848801 ~ 3849054 (-) True G682783
TU803932 lncRNA upstream 32406 3878104 ~ 3878332 (-) True G682799
TU803933 lncRNA upstream 32784 3878482 ~ 3878740 (-) True G682800
TU803934 lncRNA upstream 33544 3879242 ~ 3879454 (-) True G682801
TU803935 lncRNA upstream 33965 3879663 ~ 3879870 (-) True G682802
CI01180000_03824786_03831186.mRNA mRNA downstream 14176 3824669 ~ 3831186 (-) True CI01180000_03824786_03831186
CI01180000_03813694_03819279.mRNA mRNA downstream 26045 3813348 ~ 3819317 (-) True CI01180000_03813694_03819279
CI01180000_03789351_03795877.mRNA mRNA downstream 49165 3788671 ~ 3796197 (-) True CI01180000_03789351_03795877
CI01180000_03766003_03784047.mRNA mRNA downstream 60956 3765731 ~ 3784406 (-) True CI01180000_03766003_03784047
CI01180000_03695198_03697316.mRNA mRNA downstream 148046 3694823 ~ 3697316 (-) True CI01180000_03695198_03697316
CI01180000_03983803_04002213.mRNA mRNA upstream 137788 3983486 ~ 4002655 (-) True CI01180000_03983803_04002213
CI01180000_04082957_04114030.mRNA mRNA upstream 236950 4082648 ~ 4114030 (-) True CI01180000_04082957_04114030
CI01180000_04131891_04133055.mRNA mRNA upstream 285260 4130958 ~ 4133136 (-) True CI01180000_04131891_04133055
CI01180000_04327538_04335433.mRNA mRNA upstream 481662 4327360 ~ 4336389 (-) True CI01180000_04327538_04335433
CI01180000_04554549_04560819.mRNA mRNA upstream 707743 4553441 ~ 4561772 (-) True CI01180000_04554549_04560819
TU801483 other downstream 600405 3244350 ~ 3244957 (-) True G680603
TU801485 other downstream 825687 3019498 ~ 3019675 (-) False G680604
TU804315 other upstream 950562 4796260 ~ 4797842 (-) True CI01180000_04796238_04797552
TU804622 other upstream 1772509 5618207 ~ 5619271 (-) True G683394
TU804519 other upstream 1905346 5751044 ~ 5755526 (-) False G683294
TU804922 other upstream 2916377 6762075 ~ 6762844 (-) True G683673
TU805291 other upstream 3557449 7403147 ~ 7413132 (-) False G684018

Expression Profile