RNA id: TU803915


Basic Information

Item Value
RNA id TU803915
length 254
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G682783
representative True

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 3848801 ~ 3849054 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AGACACCTCTCGCGGTTCAAACAAATAGGATTGGGCAACAAACTCAAGCTCCTCCAACATTTCTCTTTAAAAATTCTTGTTTTAGACTTCTTATTTTTGACCGATGTTTTGTTTTGCTCTATCTTCTGCGTTTCTGCGTTCATCAAAACGTCATGCGTCAGATCAAAGTTCACTGTTCCGCTGGAATCGACTCAGTTACGGAAGCCAGTGATTCTTTATAAAGTTATAAATATGGATATTTTTCTTACAAAAAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU803914 lncRNA downstream 3103 3845362 ~ 3845698 (-) True G682782
TU803913 lncRNA downstream 3618 3844911 ~ 3845183 (-) True G682781
TU803874 lncRNA downstream 185649 3662735 ~ 3663152 (-) True G682743
TU803870 lncRNA downstream 189691 3658877 ~ 3659110 (-) True G682739
TU803864 lncRNA downstream 196590 3651714 ~ 3652211 (-) True G682733
TU803932 lncRNA upstream 29050 3878104 ~ 3878332 (-) True G682799
TU803933 lncRNA upstream 29428 3878482 ~ 3878740 (-) True G682800
TU803934 lncRNA upstream 30188 3879242 ~ 3879454 (-) True G682801
TU803935 lncRNA upstream 30609 3879663 ~ 3879870 (-) True G682802
TU803988 lncRNA upstream 58522 3907576 ~ 3908931 (-) False G682827
CI01180000_03824786_03831186.mRNA mRNA downstream 17615 3824669 ~ 3831186 (-) True CI01180000_03824786_03831186
CI01180000_03813694_03819279.mRNA mRNA downstream 29484 3813348 ~ 3819317 (-) True CI01180000_03813694_03819279
CI01180000_03789351_03795877.mRNA mRNA downstream 52604 3788671 ~ 3796197 (-) True CI01180000_03789351_03795877
CI01180000_03766003_03784047.mRNA mRNA downstream 64395 3765731 ~ 3784406 (-) True CI01180000_03766003_03784047
CI01180000_03695198_03697316.mRNA mRNA downstream 151485 3694823 ~ 3697316 (-) True CI01180000_03695198_03697316
CI01180000_03983803_04002213.mRNA mRNA upstream 134432 3983486 ~ 4002655 (-) True CI01180000_03983803_04002213
CI01180000_04082957_04114030.mRNA mRNA upstream 233594 4082648 ~ 4114030 (-) True CI01180000_04082957_04114030
CI01180000_04131891_04133055.mRNA mRNA upstream 281904 4130958 ~ 4133136 (-) True CI01180000_04131891_04133055
CI01180000_04327538_04335433.mRNA mRNA upstream 478306 4327360 ~ 4336389 (-) True CI01180000_04327538_04335433
CI01180000_04554549_04560819.mRNA mRNA upstream 704387 4553441 ~ 4561772 (-) True CI01180000_04554549_04560819
TU801483 other downstream 603844 3244350 ~ 3244957 (-) True G680603
TU801485 other downstream 829126 3019498 ~ 3019675 (-) False G680604
TU804315 other upstream 947206 4796260 ~ 4797842 (-) True CI01180000_04796238_04797552
TU804622 other upstream 1769153 5618207 ~ 5619271 (-) True G683394
TU804519 other upstream 1901990 5751044 ~ 5755526 (-) False G683294
TU804922 other upstream 2913021 6762075 ~ 6762844 (-) True G683673
TU805291 other upstream 3554093 7403147 ~ 7413132 (-) False G684018

Expression Profile