RNA id: TU807642


Basic Information

Item Value
RNA id TU807642
length 215
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G686149
representative True

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 11418738 ~ 11418952 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TATGACGCAGGATGTAGGAGTATTGTAAGCTTAGACGCATCTCACGGTTCAAACAAATAGGGCTGTGCAACAAACTCAAGCTCCTCTTCTCTTAGAGGATTTCGATATGACATTTCTCTTTACATTTCTTGTTTTAGACTTCTAATTCATGACCGGTGTTTTGTTTTGCTCTCTCCTCTGCGCTTCCACGTTCGTCATAGCGTTCGGGTCAAAGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU807540 lncRNA downstream 722 11415389 ~ 11418016 (-) True G686048
TU807617 lncRNA downstream 71135 11347200 ~ 11347603 (-) True G686124
TU807616 lncRNA downstream 72123 11346389 ~ 11346615 (-) True G686123
TU807614 lncRNA downstream 73573 11344844 ~ 11345165 (-) True G686121
TU807613 lncRNA downstream 74025 11344249 ~ 11344713 (-) True G686120
TU807643 lncRNA upstream 929 11419881 ~ 11420230 (-) True G686150
TU807650 lncRNA upstream 13917 11432869 ~ 11441416 (-) False G686153
TU807652 lncRNA upstream 13917 11432869 ~ 11438783 (-) False G686153
TU807653 lncRNA upstream 13917 11432869 ~ 11440289 (-) True G686153
TU807676 lncRNA upstream 55474 11474426 ~ 11476027 (-) True G686176
CI01180000_11127163_11138849.mRNA mRNA downstream 279889 11126317 ~ 11138849 (-) True CI01180000_11127163_11138849
CI01180000_11111159_11112550.mRNA mRNA downstream 306188 11110801 ~ 11112550 (-) True CI01180000_11111159_11112550
CI01180000_11106711_11107109.mRNA mRNA downstream 310844 11106466 ~ 11107894 (-) True CI01180000_11106711_11107109
CI01180000_11098239_11100667.mRNA mRNA downstream 318071 11097736 ~ 11100667 (-) True CI01180000_11098239_11100667
CI01180000_11091600_11093609.mRNA mRNA downstream 325048 11091322 ~ 11093690 (-) True CI01180000_11091600_11093609
TU807544 other downstream 75242 11341616 ~ 11343496 (-) True G686052
TU806323 other downstream 1517350 9898424 ~ 9901388 (-) True G684929
TU805835 other downstream 2694871 8722693 ~ 8723867 (-) True G684493
TU805466 other downstream 3507530 7910761 ~ 7911208 (-) False G684182
TU805357 other downstream 3835935 7579404 ~ 7582803 (-) True G684080

Expression Profile