RNA id: TU807643


Basic Information

Item Value
RNA id TU807643
length 350
lncRNA type antisense_over
GC content 0.34
exon number 1
gene id G686150
representative True

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 11419881 ~ 11420230 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CTTTTTTTTCTTTCAATTTTGATCATCTTCTTATTTGTATTTGACCCCATGGACCCATAACACATTTTAACTTAATACAAAAAAAAAGAAGAAAAAAAAAAAAGTTTAAAACGCTGTAAGCGATGTTAGTTCCAGAAGTTCCACCATACTTAGCCAACTAATAACTACGACCCTTTCGTTTTAACACAACAATGGTACTTTGAAGTGATATCTTTCAGGGAGTAAAATCATTTTCTGCATAGCATTTATAGAAAATTTCTTGAATAATAGGAGGCAGATTCAGACTTGTAACCAGAAGGTTGTGGGTTCCAGTCTCATTACCAGCAGGAAAGGTAGGTGGAGGAGTGAAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU807642 lncRNA downstream 929 11418738 ~ 11418952 (-) True G686149
TU807540 lncRNA downstream 1865 11415389 ~ 11418016 (-) True G686048
TU807617 lncRNA downstream 72278 11347200 ~ 11347603 (-) True G686124
TU807616 lncRNA downstream 73266 11346389 ~ 11346615 (-) True G686123
TU807614 lncRNA downstream 74716 11344844 ~ 11345165 (-) True G686121
TU807650 lncRNA upstream 12639 11432869 ~ 11441416 (-) False G686153
TU807652 lncRNA upstream 12639 11432869 ~ 11438783 (-) False G686153
TU807653 lncRNA upstream 12639 11432869 ~ 11440289 (-) True G686153
TU807676 lncRNA upstream 54196 11474426 ~ 11476027 (-) True G686176
TU807686 lncRNA upstream 64951 11485181 ~ 11490006 (-) True G686181
CI01180000_11127163_11138849.mRNA mRNA downstream 281032 11126317 ~ 11138849 (-) True CI01180000_11127163_11138849
CI01180000_11111159_11112550.mRNA mRNA downstream 307331 11110801 ~ 11112550 (-) True CI01180000_11111159_11112550
CI01180000_11106711_11107109.mRNA mRNA downstream 311987 11106466 ~ 11107894 (-) True CI01180000_11106711_11107109
CI01180000_11098239_11100667.mRNA mRNA downstream 319214 11097736 ~ 11100667 (-) True CI01180000_11098239_11100667
CI01180000_11091600_11093609.mRNA mRNA downstream 326191 11091322 ~ 11093690 (-) True CI01180000_11091600_11093609
TU807544 other downstream 76385 11341616 ~ 11343496 (-) True G686052
TU806323 other downstream 1518493 9898424 ~ 9901388 (-) True G684929
TU805835 other downstream 2696014 8722693 ~ 8723867 (-) True G684493
TU805466 other downstream 3508673 7910761 ~ 7911208 (-) False G684182
TU805357 other downstream 3837078 7579404 ~ 7582803 (-) True G684080

Expression Profile