RNA id: TU807652


Basic Information

Item Value
RNA id TU807652
length 556
lncRNA type antisense_over
GC content 0.49
exon number 3
gene id G686153
representative False

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 11432869 ~ 11441416 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CTCGGCAACATTGCTCAAAAAGTTGCCCTGTGTATCATCACCTTTAGTCTGCCTTACCATGGACTCACTACTGAAGAGATCTGGGTTGTTCTCATAGATGAACTTCTCCACACGAATCTGTCTCATCCTGAACATCTTGGAGCCTTTGTTCTTTTGAAGGGATAGTTCCTCCAGCATGATGTCCTTGGGTGCCCTGATTTTTTTCCCCAAGTCAAACTCTGAGGCCTCGGGCTCTGATTCATACTCATCTTGGGTTATGTGTGACAGGTCAGTGATGATCTTGGAAAGCTTTTTCCTCTTGTTGGGTGGGGCTGGTGTTCCTGACAGAGGCATGATTCCAGACAAGGCTCTAGACTGCTTACAAGACGTGGTCTCAAAGGTACAGTGAAAATAGGAAAAGGCTTGTGGCTAAGAAGTTTACCAATTCCCGGGTACCTTTGACCTGTGGCTGGACCAAGAACCCAAGGCGTGCAAAATCCAGTTGGGACTTGGATGGCAGATCTTCATCGGGGGGAGGGAGAGTCCGGGTAAAAAGGGGGAGTGAGGAGTAAGGGGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU807643 lncRNA downstream 12639 11419881 ~ 11420230 (-) True G686150
TU807642 lncRNA downstream 13917 11418738 ~ 11418952 (-) True G686149
TU807540 lncRNA downstream 14853 11415389 ~ 11418016 (-) True G686048
TU807617 lncRNA downstream 85266 11347200 ~ 11347603 (-) True G686124
TU807616 lncRNA downstream 86254 11346389 ~ 11346615 (-) True G686123
TU807676 lncRNA upstream 35643 11474426 ~ 11476027 (-) True G686176
TU807686 lncRNA upstream 46398 11485181 ~ 11490006 (-) True G686181
CI01180000_11127163_11138849.mRNA mRNA downstream 294020 11126317 ~ 11138849 (-) True CI01180000_11127163_11138849
CI01180000_11111159_11112550.mRNA mRNA downstream 320319 11110801 ~ 11112550 (-) True CI01180000_11111159_11112550
CI01180000_11106711_11107109.mRNA mRNA downstream 324975 11106466 ~ 11107894 (-) True CI01180000_11106711_11107109
CI01180000_11098239_11100667.mRNA mRNA downstream 332202 11097736 ~ 11100667 (-) True CI01180000_11098239_11100667
CI01180000_11091600_11093609.mRNA mRNA downstream 339179 11091322 ~ 11093690 (-) True CI01180000_11091600_11093609
TU807544 other downstream 89373 11341616 ~ 11343496 (-) True G686052
TU806323 other downstream 1531481 9898424 ~ 9901388 (-) True G684929
TU805835 other downstream 2709002 8722693 ~ 8723867 (-) True G684493
TU805466 other downstream 3521661 7910761 ~ 7911208 (-) False G684182
TU805357 other downstream 3850066 7579404 ~ 7582803 (-) True G684080

Expression Profile