RNA id: TCONS_00024302


Basic Information

Item Value
RNA id TCONS_00024302
length 118
lncRNA type lincRNA
GC content 0.38
exon number 2
gene id XLOC_012359
representative False

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 46561140 ~ 46722470 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ttttaaacttatacaattacatttttacagagtaAGTGTCACAGAAGGGACGACATTCAGTTCAGTAATATAACAGGACGTCAGGCTTGGAGACTGGAGACCAATAGGCAACTGGATA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000194258

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00024991 lncRNA downstream 1075668 45484644 ~ 45485472 (-) True XLOC_012354
TCONS_00024990 lncRNA downstream 1108326 45451574 ~ 45452814 (-) True XLOC_012353
TCONS_00024989 lncRNA downstream 1108607 45449069 ~ 45452533 (-) False XLOC_012353
TCONS_00024988 lncRNA downstream 1306625 45247083 ~ 45254515 (-) True XLOC_012350
TCONS_00024552 lncRNA downstream 1586752 44966956 ~ 44974388 (-) True XLOC_012344
TCONS_00024996 lncRNA upstream 28647 46751117 ~ 46874020 (-) False XLOC_012365
TCONS_00024997 lncRNA upstream 28647 46751117 ~ 46944416 (-) True XLOC_012365
TCONS_00024998 lncRNA upstream 49941 46772411 ~ 46773165 (-) True XLOC_012366
TCONS_00024999 lncRNA upstream 71900 46794370 ~ 46794721 (-) True XLOC_012367
TCONS_00025000 lncRNA upstream 73052 46795522 ~ 46796753 (-) True XLOC_012368
TCONS_00024301 mRNA downstream 103518 46451371 ~ 46457622 (-) True XLOC_012358
TCONS_00024299 mRNA downstream 826681 45731865 ~ 45734459 (-) False XLOC_012357
TCONS_00024298 mRNA downstream 826909 45731865 ~ 45734231 (-) False XLOC_012357
TCONS_00024300 mRNA downstream 827739 45731867 ~ 45733401 (-) True XLOC_012357
TCONS_00024296 mRNA downstream 1008509 45529453 ~ 45552631 (-) False XLOC_012356
TCONS_00024307 mRNA upstream 93178 46815648 ~ 46817295 (-) True XLOC_012369
TCONS_00024310 mRNA upstream 126189 46848659 ~ 46850299 (-) True XLOC_012373
TCONS_00024312 mRNA upstream 209449 46931919 ~ 46933567 (-) True XLOC_012376
TCONS_00024314 mRNA upstream 266643 46989113 ~ 46990003 (-) True XLOC_012378
TCONS_00024315 mRNA upstream 360976 47083446 ~ 47090440 (-) False XLOC_012379
TCONS_00024283 other downstream 1409347 45140329 ~ 45151793 (-) False XLOC_012349
TCONS_00024269 other downstream 2077523 44483490 ~ 44483617 (-) False XLOC_012339
TCONS_00024261 other downstream 2502213 44058811 ~ 44058927 (-) True XLOC_012333
TCONS_00024257 other downstream 2697516 43850762 ~ 43863624 (-) True XLOC_012331
TCONS_00024224 other downstream 3718277 42825291 ~ 42842863 (-) True XLOC_012313
TCONS_00024306 other upstream 17736 46740206 ~ 46740303 (-) True XLOC_012364
TCONS_00024308 other upstream 97278 46819748 ~ 46819845 (-) True XLOC_012370
TCONS_00024319 other upstream 787810 47510280 ~ 47510396 (-) True XLOC_012384
TCONS_00024320 other upstream 1440481 48162951 ~ 48163065 (-) True XLOC_012385
TCONS_00024334 other upstream 2504734 49227204 ~ 49227319 (-) True XLOC_012399