Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00025385 |
| length | 908 |
| RNA type | mRNA |
| GC content | 0.39 |
| exon number | 4 |
| gene id | XLOC_012713 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007129.7 |
| NCBI id | CM002902.2 |
| chromosome length | 51023478 |
| location | 17020967 ~ 17024878 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0007064 | mitotic sister chromatid cohesion | biological_process |
| GO:0031390 | Ctf18 RFC-like complex | cellular_component |
| GO:0003674 | molecular_function | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-050419-148 | Predicted to act upstream of or within mitotic sister chromatid cohesion. Predicted to be part of Ctf18 RFC-like complex. Orthologous to human CHTF8 (chromosome transmission fidelity factor 8). |
| ensembl_id | ENSDART00000189168 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00027081 | lncRNA | upstream | 32753 | 16986090 ~ 16988214 (+) | False | XLOC_012712 |
| TCONS_00026886 | lncRNA | upstream | 79120 | 16941462 ~ 16941847 (+) | True | XLOC_012709 |
| TCONS_00027079 | lncRNA | upstream | 158548 | 16798755 ~ 16862419 (+) | False | XLOC_012707 |
| TCONS_00027080 | lncRNA | upstream | 184902 | 16799055 ~ 16836065 (+) | True | XLOC_012707 |
| TCONS_00027078 | lncRNA | upstream | 705156 | 16310121 ~ 16315811 (+) | True | XLOC_012700 |
| TCONS_00027082 | lncRNA | downstream | 154521 | 17178493 ~ 17180077 (+) | True | XLOC_012716 |
| TCONS_00027083 | lncRNA | downstream | 450003 | 17473975 ~ 17483224 (+) | True | XLOC_012719 |
| TCONS_00027084 | lncRNA | downstream | 452403 | 17476375 ~ 17476883 (+) | True | XLOC_012720 |
| TCONS_00025404 | lncRNA | downstream | 559511 | 17583483 ~ 17585751 (+) | True | XLOC_012724 |
| TCONS_00027085 | lncRNA | downstream | 1089071 | 18113043 ~ 18165017 (+) | False | XLOC_012734 |
| TCONS_00025384 | mRNA | upstream | 31250 | 16986903 ~ 16989717 (+) | True | XLOC_012712 |
| TCONS_00025383 | mRNA | upstream | 33761 | 16986495 ~ 16987206 (+) | False | XLOC_012712 |
| TCONS_00025377 | mRNA | upstream | 49283 | 16960966 ~ 16971684 (+) | False | XLOC_012710 |
| TCONS_00025378 | mRNA | upstream | 49283 | 16960971 ~ 16971684 (+) | False | XLOC_012710 |
| TCONS_00025379 | mRNA | upstream | 53925 | 16963881 ~ 16967042 (+) | True | XLOC_012710 |
| TCONS_00025388 | mRNA | downstream | 127944 | 17151916 ~ 17173920 (+) | False | XLOC_012715 |
| TCONS_00025389 | mRNA | downstream | 131924 | 17155896 ~ 17173920 (+) | True | XLOC_012715 |
| TCONS_00025390 | mRNA | downstream | 394282 | 17418254 ~ 17426306 (+) | True | XLOC_012717 |
| TCONS_00025391 | mRNA | downstream | 404286 | 17428258 ~ 17461796 (+) | False | XLOC_012718 |
| TCONS_00025392 | mRNA | downstream | 404534 | 17428506 ~ 17461665 (+) | True | XLOC_012718 |
| TCONS_00025380 | other | upstream | 37901 | 16978628 ~ 16983066 (+) | False | XLOC_012711 |
| TCONS_00025381 | other | upstream | 37901 | 16978716 ~ 16983066 (+) | False | XLOC_012711 |
| TCONS_00025382 | other | upstream | 37901 | 16979565 ~ 16983066 (+) | True | XLOC_012711 |
| TCONS_00025369 | other | upstream | 298985 | 16721799 ~ 16721982 (+) | True | XLOC_012704 |
| TCONS_00025367 | other | upstream | 301777 | 16715951 ~ 16719190 (+) | False | XLOC_012703 |
| TCONS_00025387 | other | downstream | 48103 | 17072075 ~ 17074021 (+) | True | XLOC_012714 |
| TCONS_00025397 | other | downstream | 513339 | 17537311 ~ 17566512 (+) | False | XLOC_012723 |
| TCONS_00025401 | other | downstream | 556187 | 17580159 ~ 17580245 (+) | True | XLOC_012723 |
| TCONS_00025408 | other | downstream | 576789 | 17600761 ~ 17608571 (+) | False | XLOC_012725 |
| TCONS_00025409 | other | downstream | 576974 | 17600946 ~ 17605795 (+) | False | XLOC_012725 |
