Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00002067 |
| length | 927 |
| RNA type | nonsense_mediated_decay |
| GC content | 0.47 |
| exon number | 9 |
| gene id | XLOC_001269 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007112.7 |
| NCBI id | CM002885.2 |
| chromosome length | 59578282 |
| location | 26740718 ~ 26782573 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0005737 | cytoplasm | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-040121-3 | Predicted to enable lipid binding activity. Predicted to be located in cytoplasm and membrane. Is expressed in nervous system; neural plate; neural tube; polster; and trigeminal placode. Orthologous to human SH3GL2 (SH3 domain containing GRB2 like 2, endophilin A1). |
| ensembl_id | ENSDART00000152406 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00003421 | lncRNA | downstream | 71987 | 26665758 ~ 26669757 (-) | True | XLOC_001266 |
| TCONS_00002061 | lncRNA | downstream | 78321 | 26662477 ~ 26663423 (-) | True | XLOC_001265 |
| TCONS_00002954 | lncRNA | downstream | 146685 | 26554880 ~ 26595059 (-) | True | XLOC_001263 |
| TCONS_00002058 | lncRNA | downstream | 166484 | 26573435 ~ 26575260 (-) | True | XLOC_001264 |
| TCONS_00002955 | lncRNA | downstream | 167003 | 26573429 ~ 26574741 (-) | False | XLOC_001264 |
| TCONS_00002073 | lncRNA | upstream | 211593 | 26994111 ~ 27000838 (-) | False | XLOC_001270 |
| TCONS_00003422 | lncRNA | upstream | 236148 | 27018666 ~ 27024844 (-) | False | XLOC_001271 |
| TCONS_00003423 | lncRNA | upstream | 240137 | 27022655 ~ 27024844 (-) | True | XLOC_001271 |
| TCONS_00002956 | lncRNA | upstream | 962280 | 27744798 ~ 27750558 (-) | False | XLOC_001274 |
| TCONS_00003424 | lncRNA | upstream | 963298 | 27745816 ~ 27746625 (-) | True | XLOC_001274 |
| TCONS_00002064 | mRNA | downstream | 38752 | 26701610 ~ 26702992 (-) | False | XLOC_001268 |
| TCONS_00002065 | mRNA | downstream | 38814 | 26701866 ~ 26702930 (-) | True | XLOC_001268 |
| TCONS_00002062 | mRNA | downstream | 65353 | 26670828 ~ 26676391 (-) | False | XLOC_001267 |
| TCONS_00002063 | mRNA | downstream | 65775 | 26670847 ~ 26675969 (-) | True | XLOC_001267 |
| TCONS_00002059 | mRNA | downstream | 76904 | 26660369 ~ 26664840 (-) | False | XLOC_001265 |
| TCONS_00002069 | mRNA | upstream | 39445 | 26821963 ~ 27014935 (-) | False | XLOC_001270 |
| TCONS_00002068 | mRNA | upstream | 39445 | 26821963 ~ 27014935 (-) | False | XLOC_001270 |
| TCONS_00002071 | mRNA | upstream | 43870 | 26826388 ~ 27014935 (-) | False | XLOC_001270 |
| TCONS_00002070 | mRNA | upstream | 43870 | 26826388 ~ 27014935 (-) | False | XLOC_001270 |
| TCONS_00002072 | mRNA | upstream | 44491 | 26827009 ~ 27014872 (-) | False | XLOC_001270 |
| TCONS_00002060 | other | downstream | 77091 | 26661433 ~ 26664653 (-) | False | XLOC_001265 |
| TCONS_00002057 | other | downstream | 202120 | 26538961 ~ 26539624 (-) | True | XLOC_001262 |
| TCONS_00002054 | other | downstream | 302394 | 26438597 ~ 26439350 (-) | False | XLOC_001261 |
| TCONS_00002052 | other | downstream | 343441 | 26394365 ~ 26398303 (-) | False | XLOC_001260 |
| TCONS_00002051 | other | downstream | 343470 | 26391755 ~ 26398274 (-) | False | XLOC_001260 |
| TCONS_00002079 | other | upstream | 1305630 | 28088148 ~ 28089546 (-) | True | XLOC_001275 |
| TCONS_00002080 | other | upstream | 1526098 | 28308616 ~ 28309012 (-) | True | XLOC_001276 |
| TCONS_00002081 | other | upstream | 1566440 | 28348958 ~ 28364598 (-) | True | XLOC_001277 |
| TCONS_00002086 | other | upstream | 1925723 | 28708241 ~ 28709951 (-) | True | XLOC_001281 |
| TCONS_00002089 | other | upstream | 1967058 | 28749576 ~ 28759469 (-) | False | XLOC_001282 |
