Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00030350 |
| length | 1341 |
| lncRNA type | antisense_over |
| GC content | 0.43 |
| exon number | 3 |
| gene id | XLOC_015051 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007130.7 |
| NCBI id | CM002903.2 |
| chromosome length | 48449771 |
| location | 46999261 ~ 47173408 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0035278 | miRNA mediated inhibition of translation | biological_process |
| GO:0034249 | negative regulation of cellular amide metabolic process | biological_process |
| GO:0017148 | negative regulation of translation | biological_process |
| GO:0040033 | negative regulation of translation, ncRNA-mediated | biological_process |
| GO:0045974 | regulation of translation, ncRNA-mediated | biological_process |
| GO:0016442 | RISC complex | cellular_component |
| GO:0031332 | RNAi effector complex | cellular_component |
| GO:0061980 | regulatory RNA binding | molecular_function |
| GO:0035198 | miRNA binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00030348 | lncRNA | downstream | 234900 | 46724859 ~ 46764361 (-) | False | XLOC_015048 |
| TCONS_00030349 | lncRNA | downstream | 235293 | 46737118 ~ 46763968 (-) | True | XLOC_015048 |
| TCONS_00030347 | lncRNA | downstream | 507228 | 46491583 ~ 46492033 (-) | True | XLOC_015047 |
| TCONS_00030346 | lncRNA | downstream | 578703 | 46412613 ~ 46420558 (-) | False | XLOC_015045 |
| TCONS_00029633 | lncRNA | downstream | 579480 | 46416806 ~ 46419781 (-) | True | XLOC_015045 |
| TCONS_00029653 | lncRNA | upstream | 376197 | 47549568 ~ 47550348 (-) | False | XLOC_015059 |
| TCONS_00030352 | lncRNA | upstream | 587526 | 47760897 ~ 47761491 (-) | True | XLOC_015063 |
| TCONS_00029800 | lncRNA | upstream | 600546 | 47773917 ~ 47778637 (-) | True | XLOC_015064 |
| TCONS_00030353 | lncRNA | upstream | 758527 | 47931898 ~ 47932934 (-) | True | XLOC_015066 |
| TCONS_00030354 | lncRNA | upstream | 844335 | 48017706 ~ 48024071 (-) | False | XLOC_015069 |
| TCONS_00029638 | mRNA | downstream | 41293 | 46812272 ~ 46957968 (-) | True | XLOC_015050 |
| TCONS_00029637 | mRNA | downstream | 221298 | 46772018 ~ 46777963 (-) | True | XLOC_015049 |
| TCONS_00029636 | mRNA | downstream | 223699 | 46768266 ~ 46775562 (-) | False | XLOC_015049 |
| TCONS_00029635 | mRNA | downstream | 261439 | 46724211 ~ 46737822 (-) | False | XLOC_015048 |
| TCONS_00029634 | mRNA | downstream | 432831 | 46421349 ~ 46566430 (-) | True | XLOC_015046 |
| TCONS_00029640 | mRNA | upstream | 17634 | 47191005 ~ 47276297 (-) | True | XLOC_015052 |
| TCONS_00029641 | mRNA | upstream | 112402 | 47285773 ~ 47323267 (-) | True | XLOC_015053 |
| TCONS_00029644 | mRNA | upstream | 256351 | 47429722 ~ 47455944 (-) | False | XLOC_015056 |
| TCONS_00029645 | mRNA | upstream | 256351 | 47429722 ~ 47456787 (-) | False | XLOC_015056 |
| TCONS_00029646 | mRNA | upstream | 257600 | 47430971 ~ 47452874 (-) | True | XLOC_015056 |
| TCONS_00029625 | other | downstream | 976382 | 46019877 ~ 46022879 (-) | False | XLOC_015042 |
| TCONS_00029620 | other | downstream | 1039078 | 45955079 ~ 45960183 (-) | True | XLOC_015039 |
| TCONS_00029605 | other | downstream | 2936712 | 44049647 ~ 44062549 (-) | False | XLOC_015032 |
| TCONS_00029608 | other | downstream | 2936729 | 44058992 ~ 44062532 (-) | False | XLOC_015032 |
| TCONS_00029587 | other | downstream | 3968373 | 43029382 ~ 43030888 (-) | True | XLOC_015020 |
| TCONS_00029642 | other | upstream | 226818 | 47400189 ~ 47400307 (-) | True | XLOC_015054 |
| TCONS_00029643 | other | upstream | 242219 | 47415590 ~ 47416405 (-) | True | XLOC_015055 |
| TCONS_00029659 | other | upstream | 394342 | 47567713 ~ 47567848 (-) | True | XLOC_015061 |
