RNA id: TCONS_00029641



Basic Information


Item Value
RNA id TCONS_00029641
length 243
RNA type mRNA
GC content 0.36
exon number 12
gene id XLOC_015053
representative True

Chromosome Information


Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 47285773 ~ 47323267 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


GGGATTATaaacttctTTCAAAACCAAGAAGTAtcttataacagtgagtctccaTGTGACATAATAACAGCCAGTTATTTTAAGgggtcgccacagcggaatgaaccaccaactattccaCCTGAGAAGACAAACATGAGCATTTCAATTTACTATTGTGCTTTATATGCTTGCTCATCTATAACATGTGTGTTTTTTGGGGGAATTTGGGAACAGAAATttttgacaAATATAAATccttgt

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000190077

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00030351 lncRNA downstream 112365 47145193 ~ 47173408 (-) True XLOC_015051
TCONS_00030350 lncRNA downstream 112402 46999261 ~ 47173371 (-) False XLOC_015051
TCONS_00029639 lncRNA downstream 112675 47123688 ~ 47173098 (-) False XLOC_015051
TCONS_00030348 lncRNA downstream 521412 46724859 ~ 46764361 (-) False XLOC_015048
TCONS_00029653 lncRNA upstream 226301 47549568 ~ 47550348 (-) False XLOC_015059
TCONS_00030352 lncRNA upstream 437630 47760897 ~ 47761491 (-) True XLOC_015063
TCONS_00029800 lncRNA upstream 450650 47773917 ~ 47778637 (-) True XLOC_015064
TCONS_00030353 lncRNA upstream 608631 47931898 ~ 47932934 (-) True XLOC_015066
TCONS_00030354 lncRNA upstream 694439 48017706 ~ 48024071 (-) False XLOC_015069
TCONS_00029640 mRNA downstream 9476 47191005 ~ 47276297 (-) True XLOC_015052
TCONS_00029638 mRNA downstream 327805 46812272 ~ 46957968 (-) True XLOC_015050
TCONS_00029637 mRNA downstream 507810 46772018 ~ 46777963 (-) True XLOC_015049
TCONS_00029636 mRNA downstream 510211 46768266 ~ 46775562 (-) False XLOC_015049
TCONS_00029635 mRNA downstream 547951 46724211 ~ 46737822 (-) False XLOC_015048
TCONS_00029644 mRNA upstream 106455 47429722 ~ 47455944 (-) False XLOC_015056
TCONS_00029645 mRNA upstream 106455 47429722 ~ 47456787 (-) False XLOC_015056
TCONS_00029646 mRNA upstream 107704 47430971 ~ 47452874 (-) True XLOC_015056
TCONS_00029647 mRNA upstream 137481 47460748 ~ 47474725 (-) True XLOC_015057
TCONS_00029648 mRNA upstream 198740 47522007 ~ 47523793 (-) False XLOC_015058
TCONS_00029625 other downstream 1262894 46019877 ~ 46022879 (-) False XLOC_015042
TCONS_00029620 other downstream 1325590 45955079 ~ 45960183 (-) True XLOC_015039
TCONS_00029605 other downstream 3223224 44049647 ~ 44062549 (-) False XLOC_015032
TCONS_00029608 other downstream 3223241 44058992 ~ 44062532 (-) False XLOC_015032
TCONS_00029587 other downstream 4254885 43029382 ~ 43030888 (-) True XLOC_015020
TCONS_00029642 other upstream 76922 47400189 ~ 47400307 (-) True XLOC_015054
TCONS_00029643 other upstream 92323 47415590 ~ 47416405 (-) True XLOC_015055
TCONS_00029659 other upstream 244446 47567713 ~ 47567848 (-) True XLOC_015061