Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00029648 |
| length | 1296 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 2 |
| gene id | XLOC_015058 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007130.7 |
| NCBI id | CM002903.2 |
| chromosome length | 48449771 |
| location | 47522007 ~ 47527192 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0038098 | sequestering of BMP from receptor via BMP binding | biological_process |
| GO:0009887 | animal organ morphogenesis | biological_process |
| GO:0005576 | extracellular region | cellular_component |
| GO:0005615 | extracellular space | cellular_component |
| GO:0005125 | cytokine activity | molecular_function |
| GO:0036122 | BMP binding | molecular_function |
| GO:0048018 | receptor ligand activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-040625-1 | Predicted to enable BMP binding activity and receptor ligand activity. Predicted to be involved in animal organ morphogenesis and sequestering of BMP from receptor via BMP binding activity. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in several structures, including cranial vault; notochord; pectoral fin bud; pronephric duct; and segmental plate. Orthologous to human GREM1 (gremlin 1, DAN family BMP antagonist). |
| ensembl_id | ENSDART00000124234 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00030351 | lncRNA | downstream | 348599 | 47145193 ~ 47173408 (-) | True | XLOC_015051 |
| TCONS_00030350 | lncRNA | downstream | 348636 | 46999261 ~ 47173371 (-) | False | XLOC_015051 |
| TCONS_00029639 | lncRNA | downstream | 348909 | 47123688 ~ 47173098 (-) | False | XLOC_015051 |
| TCONS_00030348 | lncRNA | downstream | 757646 | 46724859 ~ 46764361 (-) | False | XLOC_015048 |
| TCONS_00029653 | lncRNA | upstream | 25775 | 47549568 ~ 47550348 (-) | False | XLOC_015059 |
| TCONS_00030352 | lncRNA | upstream | 237104 | 47760897 ~ 47761491 (-) | True | XLOC_015063 |
| TCONS_00029800 | lncRNA | upstream | 250124 | 47773917 ~ 47778637 (-) | True | XLOC_015064 |
| TCONS_00030353 | lncRNA | upstream | 408105 | 47931898 ~ 47932934 (-) | True | XLOC_015066 |
| TCONS_00030354 | lncRNA | upstream | 493913 | 48017706 ~ 48024071 (-) | False | XLOC_015069 |
| TCONS_00029647 | mRNA | downstream | 47282 | 47460748 ~ 47474725 (-) | True | XLOC_015057 |
| TCONS_00029645 | mRNA | downstream | 65220 | 47429722 ~ 47456787 (-) | False | XLOC_015056 |
| TCONS_00029644 | mRNA | downstream | 66063 | 47429722 ~ 47455944 (-) | False | XLOC_015056 |
| TCONS_00029646 | mRNA | downstream | 69133 | 47430971 ~ 47452874 (-) | True | XLOC_015056 |
| TCONS_00029641 | mRNA | downstream | 198740 | 47285773 ~ 47323267 (-) | True | XLOC_015053 |
| TCONS_00029650 | mRNA | upstream | 229 | 47524022 ~ 47527192 (-) | False | XLOC_015058 |
| TCONS_00029651 | mRNA | upstream | 242 | 47524035 ~ 47527095 (-) | False | XLOC_015058 |
| TCONS_00029652 | mRNA | upstream | 2420 | 47526213 ~ 47527093 (-) | True | XLOC_015058 |
| TCONS_00029654 | mRNA | upstream | 25777 | 47549570 ~ 47555956 (-) | True | XLOC_015059 |
| TCONS_00029655 | mRNA | upstream | 41097 | 47564890 ~ 47570672 (-) | False | XLOC_015060 |
| TCONS_00029643 | other | downstream | 105602 | 47415590 ~ 47416405 (-) | True | XLOC_015055 |
| TCONS_00029642 | other | downstream | 121700 | 47400189 ~ 47400307 (-) | True | XLOC_015054 |
| TCONS_00029625 | other | downstream | 1499128 | 46019877 ~ 46022879 (-) | False | XLOC_015042 |
| TCONS_00029620 | other | downstream | 1561824 | 45955079 ~ 45960183 (-) | True | XLOC_015039 |
| TCONS_00029608 | other | downstream | 3459475 | 44058992 ~ 44062532 (-) | False | XLOC_015032 |
| TCONS_00029659 | other | upstream | 43920 | 47567713 ~ 47567848 (-) | True | XLOC_015061 |
