RNA id: TCONS_00032667


Basic Information

Item Value
RNA id TCONS_00032667
length 2161
RNA type mRNA
GC content 0.41
exon number 8
gene id XLOC_016637
representative False

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 36914408 ~ 36932253 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ACTTAGCAAAAAGGAAGCCTGCATCCTCTGTCGACTTGTTCCAAAatgagCACCATCATATCCAGCTTAACCAAAAAACAGAAGAAGAAACTTTGCTCATTGCTAAACAATGCCAAACTCAGCCTGCTGTACAAAGCCAGTGTACATGGCTACAGTACTAGTACATTTAACCAAAAGTGTGATAAGCAGGGTCCAACTGTTGTTGTTGCTTACAATAAGTCTGGTTATGTTTTTGGAGCTTTTACCAGCAAAGATTATGGTCAAACAGGCCAAAACATTGTGGATGACAAAGCTTTTCTCTTCAGTTTTAACGACAAAGAGCTTGAAGAAGATCCTCTGCGTGTGATCAGTGGAAATCCAAAGTTTGCTTTCACTGACAATGGTCCAAACTTCGACTCTTTAATATTTCTTTACAATAGTACAGCCACAGTCAACAGTAATCCAGGAACCTACCAGTTTGATCCACAGCGGATGCATGGCAATGACTTAATCTTGACAGAATGTGAGGTGTACAGAGTGGAAGGTTGTGGAGGGCTGATGGAGAAACCATGGAGAAATGTGCACTGGGACTCGGAGAAAAAGAAGGCACTCTTGAGCTCCATCTCCAGCTGGAAGCCTTCTGTGAGCTCAATTAAACAGGCTCGGATTCTGTTGCTGGGTCCCATTGGTGCTGGAAAATCAAGCTTCTTCAACTCCATCAACTCTGTATTCAAGGGTTACGTGAGCATGCAGGCCAACACTGGCACTGCCGAAACCAGTTTGACTACTCAGTTCCGTACCTACTACACAAAGCCAGGCAGCAGTGTCAGCCATGTTCCCTTCACTCTGTGTGACACAATGGGTCTGGAGGAGGGTCTGAACTGTGGTTTGGATGTGGATGATTTTGCCAGTATTTTGAAGGGTCACATTCAAGACCGCTACCAGTTCAACCCATCAATGCCTATACAGCCAGACTCGCCATATTTCGTTAAATCTCCTGGCTTGAAGGACAAGATTCACTGTGTGGTGTATGTGATCGACGCCTGCAAAGTGAATCTCCTTTCTGATAAAATCATTGAGAAGTTTGCAGTTTTCCGAAAGAAAACCAACCAGCTGGGTATTCCTCAGCTAGTTCTGCTGACCAAGGTGGATGAAGCCTGTCCCTTAGTGGCAGAAGACCTGAAAAATGTCTACCGGAGTCACTACATCAACCAAATGATGCAAGAGGTTAGCACTCAGCTTGGAGTTTCTCTGTCTGCTGTGGTTCCAGTGAAAAATTATTGCCAAGAACTGGAAATAGACCCTCAAACCGACATACTGCTCCTGAATGGACTTATTCAGATGCTTAGAGCTGCCGAAGGTTTTTTTGATGATTGTTACAATCCAGAGGAGAAGTCTGAGTAGTGTCAACTTGTTAAGTCATTCCTttctacatttattcattaagcagatgcttttatcaaCAGCAACTTAGCACTAAAGTAGTTTAACTCAGGTCTATTTTTAGCTAGATGCTTCATTGCTGGATGGGTAAAAATATAACCATTGTAATAGAAAGTGATATAAAAGTATTGCAAGGGTTAGGGTTATGTAGGATGATCCCTGCTGCATTTGTTTTTGCTTCTTTTGGTCTGAAGAtgcaagttgtttattaagtattCCCTTACAACTATTGCCCTCTAGGGGTGACAGTAGGCCATTTTGCAATACAGGTAGATGCTGTGTACAGTTTGAACATTGTACGTAAAATCAAAATGAGCCGACAAGTTTGACGTTTAACAAGACAATGTTTTCTGTGTATAATGGGCTCTGAGTAAACATGGTAAAGCTGTTAAGTATGTAACTCAAAGTACAAAGTCCAAGACTGTCTACTAAAGGTACTAATTCTGAATACTAACTTAGAATTAAACTTACAAAAGCTGTTACTGGAGCATTTCAAAAAGTACTTTTGAAACATACCTTTATGGTACTAATATAGAACTTTTAGGTGCAAGCGTTTACCTttagaaaaggtaccaccccagaaGCAggttttgtatctttatttctgagagtttacAGTAAAATGTTCGAGAAGCAATGTGTGCAAGAAAAATGGTGAAACTTGTAAGTAGAATAGCTCACTGTACTTTCTTGTTGATAAGGTcataaaatttcattaaaaatgtatttgttctaTTCA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000084876

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00032665 lncRNA downstream 9014 36894877 ~ 36905394 (-) False XLOC_016635
TCONS_00033885 lncRNA downstream 9329 36886743 ~ 36905079 (-) False XLOC_016635
TCONS_00032664 lncRNA downstream 12637 36894877 ~ 36901771 (-) False XLOC_016635
TCONS_00033383 lncRNA downstream 15268 36895025 ~ 36899140 (-) True XLOC_016635
TCONS_00033884 lncRNA downstream 88115 36747178 ~ 36826293 (-) True XLOC_016633
TCONS_00033886 lncRNA upstream 13990 36932699 ~ 36933692 (-) False XLOC_016638
TCONS_00032679 lncRNA upstream 217959 37136668 ~ 37140483 (-) True XLOC_016643
TCONS_00033887 lncRNA upstream 235050 37153759 ~ 37155791 (-) True XLOC_016644
TCONS_00033888 lncRNA upstream 238492 37157201 ~ 37157600 (-) True XLOC_016645
TCONS_00033889 lncRNA upstream 253099 37171808 ~ 37172825 (-) True XLOC_016646
TCONS_00032666 mRNA downstream 127 36907136 ~ 36914281 (-) True XLOC_016636
TCONS_00032663 mRNA downstream 94784 36815484 ~ 36819624 (-) True XLOC_016634
TCONS_00032662 mRNA downstream 96276 36815484 ~ 36818132 (-) False XLOC_016634
TCONS_00032661 mRNA downstream 174814 36715510 ~ 36739594 (-) True XLOC_016632
TCONS_00032656 mRNA downstream 240403 36664173 ~ 36674005 (-) False XLOC_016631
TCONS_00032669 mRNA upstream 1975 36920684 ~ 36932253 (-) True XLOC_016637
TCONS_00032670 mRNA upstream 14087 36932796 ~ 36933472 (-) True XLOC_016638
TCONS_00032671 mRNA upstream 71315 36990024 ~ 37043540 (-) False XLOC_016639
TCONS_00032672 mRNA upstream 71586 36990295 ~ 37043905 (-) True XLOC_016639
TCONS_00032673 mRNA upstream 140595 37059304 ~ 37059966 (-) True XLOC_016640
TCONS_00032658 other downstream 240489 36670656 ~ 36673919 (-) False XLOC_016631
TCONS_00032657 other downstream 243250 36664770 ~ 36671158 (-) False XLOC_016631
TCONS_00032643 other downstream 582077 36332018 ~ 36332331 (-) True XLOC_016617
TCONS_00032642 other downstream 586297 36327607 ~ 36328111 (-) True XLOC_016616
TCONS_00032641 other downstream 589412 36324496 ~ 36324996 (-) True XLOC_016615
TCONS_00032691 other upstream 486642 37405351 ~ 37409157 (-) True XLOC_016651
TCONS_00032743 other upstream 1285232 38203941 ~ 38204793 (-) False XLOC_016682
TCONS_00032764 other upstream 2144045 39062754 ~ 39068546 (-) False XLOC_016693
TCONS_00032769 other upstream 2452102 39370811 ~ 39370927 (-) True XLOC_016694
TCONS_00032776 other upstream 2816843 39735552 ~ 39752556 (-) True XLOC_016698

Expression Profile

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