RNA id: TCONS_00033051


Basic Information

Item Value
RNA id TCONS_00033051
length 639
RNA type mRNA
GC content 0.42
exon number 2
gene id XLOC_016904
representative True

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 51451103 ~ 51454868 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ctttTAGATGAAGCTTGGGTTTATGATGTGAATATTGGAGTAAAATCTGGATCACCTGGCATAATTCCATGTGTATATAAAGAAAAACTCAAAGCAAATCGTAAATACTGGTGTCAGGGGTCAGTTTGGAGCTCTTGCACTATATTAGCATATGCAAATGAAACAAGAAACAAATTCTCCATCACTGATTATCCAGAGCAAAGTGTCTTTACAGTGGAATGGCAGACTCTGCAGCCGTCAGACTCTGGATGTTACTGGTGTGCTGTAGAGATCAATGGCTATGGGACCGTAGATGATGGTTATCATATGTATCTAACGGTACaatcagCTTATGGTGTGTTTGTGAAGAGCAGCAGTGTATCTGGACATGAAGGTGGTGATGTCAGTGTTCAGTGTATCTACAGTGATATATACAGGAATACAATAAAACAATGGTGCAGAGTTAAAGATAAGCGCTGTTACGCAGTGGAGAGATCTGACACATCCCAGAATCCATCAGTGCAGATCAGTGATGATGGTGAAAGCTCCTTCACTGTGCTGATGACTCGACTGAGACTCTCTGATTCTGGATGGTATTTCTGCTCTGTTGAAGATCTGCAGGTTCTTGTTCAACTCACTGTCACTAAGCCTGGACCCAAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000172550

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00033963 lncRNA downstream 41155 51409231 ~ 51409948 (-) True XLOC_016901
TCONS_00033962 lncRNA downstream 43795 51398587 ~ 51407308 (-) False XLOC_016900
TCONS_00033416 lncRNA downstream 43977 51405600 ~ 51407126 (-) True XLOC_016900
TCONS_00033415 lncRNA downstream 79012 51369228 ~ 51372091 (-) True XLOC_016898
TCONS_00033414 lncRNA downstream 82213 51331052 ~ 51368890 (-) True XLOC_016897
TCONS_00033964 lncRNA upstream 19045 51473913 ~ 51475418 (-) False XLOC_016907
TCONS_00033417 lncRNA upstream 19048 51473916 ~ 51477055 (-) True XLOC_016907
TCONS_00033965 lncRNA upstream 28679 51483547 ~ 51484324 (-) True XLOC_016909
TCONS_00033069 lncRNA upstream 282229 51737097 ~ 51749359 (-) False XLOC_016919
TCONS_00033072 lncRNA upstream 283818 51738686 ~ 51757110 (-) False XLOC_016919
TCONS_00033047 mRNA downstream 62889 51383977 ~ 51388214 (-) False XLOC_016899
TCONS_00033048 mRNA downstream 66389 51383998 ~ 51384714 (-) True XLOC_016899
TCONS_00033045 mRNA downstream 120461 51321773 ~ 51330642 (-) False XLOC_016896
TCONS_00033046 mRNA downstream 120689 51323997 ~ 51330414 (-) True XLOC_016896
TCONS_00033041 mRNA downstream 134908 51281856 ~ 51316195 (-) False XLOC_016894
TCONS_00033053 mRNA upstream 6512 51461380 ~ 51468756 (-) True XLOC_016906
TCONS_00033054 mRNA upstream 22332 51477200 ~ 51480324 (-) True XLOC_016908
TCONS_00033055 mRNA upstream 38647 51493515 ~ 51507540 (-) False XLOC_016910
TCONS_00033056 mRNA upstream 45032 51499900 ~ 51500957 (-) True XLOC_016911
TCONS_00033057 mRNA upstream 47135 51502003 ~ 51507540 (-) True XLOC_016910
TCONS_00033050 other downstream 21613 51429173 ~ 51429490 (-) True XLOC_016903
TCONS_00033049 other downstream 35292 51415503 ~ 51415811 (-) True XLOC_016902
TCONS_00033026 other downstream 741621 50709366 ~ 50709482 (-) True XLOC_016882
TCONS_00033024 other downstream 977561 50473426 ~ 50473542 (-) True XLOC_016880
TCONS_00033003 other downstream 1681551 49767578 ~ 49769552 (-) True XLOC_016869
TCONS_00033052 other upstream 3245 51458113 ~ 51458228 (-) True XLOC_016905
TCONS_00033068 other upstream 282229 51737097 ~ 51741713 (-) False XLOC_016919
TCONS_00033071 other upstream 283818 51738686 ~ 51748935 (-) False XLOC_016919
TCONS_00033073 other upstream 291387 51746255 ~ 51749341 (-) False XLOC_016919
TCONS_00033075 other upstream 297207 51752075 ~ 51757110 (-) False XLOC_016919

Expression Profile

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