RNA id: TCONS_00033046


Basic Information

Item Value
RNA id TCONS_00033046
length 1515
RNA type mRNA
GC content 0.36
exon number 2
gene id XLOC_016896
representative True

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 51321773 ~ 51330642 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATGTCTACAGATGGAGCTTGGGTTATTAATCAAAATATAAGAGTGAAATCTGGATCTCCAGGCATTATTCCATGTCCATATGAAGAACAATATAAAGAACACCAGAAGTTTTGGTGTCAGGGATACTTTTGGAGCACCTGCAATTTATTGGCATTTGGAAATGAAACAGGAAAGAATTTTTCCATCACTGATTATCCAGCTCAGAGTGTTTTTACAGTGGAATGGCAGAATCTGCAGCCGTCAGACTCTGGACATTACTGGTGCGCTGTGGAGATCGGTGGTCCTGGGACACTAGATGCTGGTTATTATGTGTATCTGACAGTACAATCAGctcctGATGTGTCTGTGATGAGCAGCAGTGTATCTGGACATGAAGGTGGTAATGTCAGTGTTCAGTGTTTCTACAGTTCTAGATATAAGGCTTACAACAAACAGTGGTGCAGAGTTAAAGATAAGAGCTGTTACGCAGTGGAGAGATCTGACacatcccagagttcatcagtgCAGATCAGTGATGATGGTGAAAGCTCCTTCACTGTGCTGATGACTGGACTGAGACTCTCTGATTCTGGATGGTATTTCGGCTCTGTTGGAAATCTGCAGGTTCCTGTTCAACTCACTGTCACTAAACCTGAACACAAAGGTAAGATCACAAACCATAAATGACGTCcctcttaaagtcttaaaactaATAATGTTTTCTTCTCTCCTTTCACACTGTGACAACTATTCCAACAACTCCAACATCTGCCTCTGGAACAGACCTGTAGGtataattttaacaatatttagAAGAGTAAAACTCAAGGAAATTAATAGTAGCCAGACCATTTTAATGCAACCTGTTAAAGTTGAATCAGAGCTGtgtataacattttattattaacaacatcAATGTTGCTGTATATGTCTGTGATTCTATTGTTATTTATTGGAAGCTCTTATATTTCTTTATCTTGTTTTACAGGTACACAACACAGCCGTCTGCCAAACTAATTCCTACAAGTAATAAACTAAATGATAAGCAGCATTGTTTTTAATACTATTATAATTTCttatgtttaatattaaatatataaaatggctTATCTAATCTAATTCACAATAAACTTGATAATTATAACTTTAAAATTAATGCGCTATATAAAGGTTTGCATTATTAAAACTAAGATGAAAATCATGATTAAATTTACCTTATTTCgcctcaaaaaacaaacattatgatCAAACTAATGAATCTTTTTTTCCTGCCTTTTACAGCAGCTTTGACTGCCGTTTCAAAACTCAGGACAAACATGTAAGTGTTTTATATTGCTACAATATTCTTTAAGCTTGTTATTTAATCATTCAGAATGAGATATAGTAACAATTCTATCTTGCAGAAATATATAGGGCAATATGTAAAATGACCAAGGGCAGACAGTAGGTTTGAACATTGAGGGGTTGAAGTGTGTCATTTTTGGTGAACCAACCTTTTAAGAATGTAAAGTTCAGGATTTTTGGGAAAAGGTGGGG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000186450

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00033961 lncRNA downstream 23079 51299328 ~ 51300918 (-) False XLOC_016895
TCONS_00033960 lncRNA downstream 116550 51175997 ~ 51207447 (-) True XLOC_016890
TCONS_00033959 lncRNA downstream 134290 51175997 ~ 51189707 (-) False XLOC_016890
TCONS_00033958 lncRNA downstream 533399 50790093 ~ 50790598 (-) True XLOC_016884
TCONS_00033957 lncRNA downstream 533416 50774409 ~ 50790581 (-) False XLOC_016884
TCONS_00033414 lncRNA upstream 638 51331052 ~ 51368890 (-) True XLOC_016897
TCONS_00033415 lncRNA upstream 38814 51369228 ~ 51372091 (-) True XLOC_016898
TCONS_00033962 lncRNA upstream 68173 51398587 ~ 51407308 (-) False XLOC_016900
TCONS_00033416 lncRNA upstream 75186 51405600 ~ 51407126 (-) True XLOC_016900
TCONS_00033963 lncRNA upstream 78817 51409231 ~ 51409948 (-) True XLOC_016901
TCONS_00033041 mRNA downstream 7802 51281856 ~ 51316195 (-) False XLOC_016894
TCONS_00033043 mRNA downstream 7807 51307965 ~ 51316190 (-) False XLOC_016894
TCONS_00033044 mRNA downstream 7810 51314851 ~ 51316187 (-) True XLOC_016894
TCONS_00033042 mRNA downstream 20060 51300617 ~ 51303937 (-) True XLOC_016895
TCONS_00033040 mRNA downstream 33390 51281779 ~ 51290607 (-) False XLOC_016894
TCONS_00033047 mRNA upstream 53563 51383977 ~ 51388214 (-) False XLOC_016899
TCONS_00033048 mRNA upstream 53584 51383998 ~ 51384714 (-) True XLOC_016899
TCONS_00033051 mRNA upstream 120689 51451103 ~ 51454868 (-) True XLOC_016904
TCONS_00033053 mRNA upstream 130966 51461380 ~ 51468756 (-) True XLOC_016906
TCONS_00033054 mRNA upstream 146786 51477200 ~ 51480324 (-) True XLOC_016908
TCONS_00033026 other downstream 614515 50709366 ~ 50709482 (-) True XLOC_016882
TCONS_00033024 other downstream 850455 50473426 ~ 50473542 (-) True XLOC_016880
TCONS_00033003 other downstream 1554445 49767578 ~ 49769552 (-) True XLOC_016869
TCONS_00033002 other downstream 1656948 49666756 ~ 49667049 (-) True XLOC_016868
TCONS_00032992 other downstream 2577185 48746683 ~ 48746812 (-) True XLOC_016857
TCONS_00033049 other upstream 85089 51415503 ~ 51415811 (-) True XLOC_016902
TCONS_00033050 other upstream 98759 51429173 ~ 51429490 (-) True XLOC_016903
TCONS_00033052 other upstream 127699 51458113 ~ 51458228 (-) True XLOC_016905
TCONS_00033068 other upstream 406683 51737097 ~ 51741713 (-) False XLOC_016919
TCONS_00033071 other upstream 408272 51738686 ~ 51748935 (-) False XLOC_016919

Expression Profile

//