Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00040093 |
| length | 1432 |
| RNA type | mRNA |
| GC content | 0.37 |
| exon number | 6 |
| gene id | XLOC_020125 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007133.7 |
| NCBI id | CM002906.2 |
| chromosome length | 39133080 |
| location | 6613020 ~ 6690829 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-060503-682 | Predicted to be located in membrane. Predicted to be integral component of membrane. |
| ensembl_id | ENSDART00000147482 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00041868 | lncRNA | upstream | 143415 | 6533698 ~ 6534014 (+) | True | XLOC_020122 |
| TCONS_00042032 | lncRNA | upstream | 178127 | 6494811 ~ 6499302 (+) | True | XLOC_020120 |
| TCONS_00042031 | lncRNA | upstream | 285812 | 6384005 ~ 6391617 (+) | False | XLOC_020117 |
| TCONS_00042030 | lncRNA | upstream | 401246 | 6269446 ~ 6276183 (+) | True | XLOC_020114 |
| TCONS_00041867 | lncRNA | upstream | 510677 | 6165804 ~ 6166752 (+) | True | XLOC_020111 |
| TCONS_00041870 | lncRNA | downstream | 121320 | 6812149 ~ 6812872 (+) | True | XLOC_020131 |
| TCONS_00042033 | lncRNA | downstream | 140944 | 6831773 ~ 6970044 (+) | False | XLOC_020132 |
| TCONS_00042034 | lncRNA | downstream | 179462 | 6870291 ~ 6873611 (+) | True | XLOC_020135 |
| TCONS_00041871 | lncRNA | downstream | 188912 | 6879741 ~ 6881278 (+) | True | XLOC_020136 |
| TCONS_00042035 | lncRNA | downstream | 191481 | 6882310 ~ 6966536 (+) | False | XLOC_020132 |
| TCONS_00040090 | mRNA | upstream | 89501 | 6587280 ~ 6587928 (+) | True | XLOC_020124 |
| TCONS_00040088 | mRNA | upstream | 161605 | 6512469 ~ 6515824 (+) | True | XLOC_020121 |
| TCONS_00040087 | mRNA | upstream | 202011 | 6471584 ~ 6475418 (+) | True | XLOC_020119 |
| TCONS_00040085 | mRNA | upstream | 256271 | 6382613 ~ 6421158 (+) | False | XLOC_020117 |
| TCONS_00040094 | mRNA | downstream | 7098 | 6697927 ~ 6698575 (+) | True | XLOC_020126 |
| TCONS_00040095 | mRNA | downstream | 20720 | 6711549 ~ 6712197 (+) | True | XLOC_020127 |
| TCONS_00040096 | mRNA | downstream | 36437 | 6727266 ~ 6727914 (+) | True | XLOC_020128 |
| TCONS_00040097 | mRNA | downstream | 49210 | 6740039 ~ 6741422 (+) | True | XLOC_020129 |
| TCONS_00040098 | mRNA | downstream | 66912 | 6757741 ~ 6759019 (+) | True | XLOC_020130 |
| TCONS_00040089 | other | upstream | 100489 | 6571847 ~ 6576940 (+) | True | XLOC_020123 |
| TCONS_00040079 | other | upstream | 387079 | 6290234 ~ 6290350 (+) | True | XLOC_020115 |
| TCONS_00040065 | other | upstream | 864975 | 5810877 ~ 5812454 (+) | True | XLOC_020101 |
| TCONS_00040051 | other | upstream | 1369855 | 5307485 ~ 5307574 (+) | True | XLOC_020090 |
| TCONS_00040050 | other | upstream | 1377373 | 5299951 ~ 5300056 (+) | True | XLOC_020089 |
| TCONS_00040103 | other | downstream | 252574 | 6943403 ~ 6948506 (+) | False | XLOC_020139 |
| TCONS_00040108 | other | downstream | 748698 | 7439527 ~ 7444022 (+) | False | XLOC_020142 |
| TCONS_00040109 | other | downstream | 752486 | 7443315 ~ 7444045 (+) | False | XLOC_020142 |
| TCONS_00040110 | other | downstream | 752770 | 7443599 ~ 7444205 (+) | True | XLOC_020142 |
| TCONS_00040122 | other | downstream | 1574704 | 8265533 ~ 8265649 (+) | True | XLOC_020159 |
