RNA id: TCONS_00043274



Basic Information


Item Value
RNA id TCONS_00043274
length 732
RNA type processed_transcript
GC content 0.36
exon number 2
gene id XLOC_021824
representative True

Chromosome Information


Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 33759747 ~ 33760665 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


tagcaataaatgaatgtattttacaAACAGCACAAGTCTTACAAAATCCACTCAAACTGGAAAGCAACTGGAATTGACCAATCAACTCCAATGTTCAACATGCCCTTGAAACAATGAAAACTTTACAGGTTAGTGCCGCACACATCTAACCGTAAACTAAATGACAGAGTCTAATCCAGGGTAGGGCAAACTTGGgtttggagggctggttttaCCCACCCCTGGTGTAATCAGTAGAAAATCAATGGTTCATTCAATCCTTCAAAATCAGTCGATTCCTAGAGGGAACTAATTTTGGTTctactttaaataaaagtataaaagaataataaattgAGTACAAACTGCAATTATCAATCAATGCCGTGTAGAAAAATCATTTGGAATTCTGGCCATTTATACGTATGAAAAACGGTTATGAAGCAGAAAGACACAAAATGCCCAATCACAACAACCAAGAGTGTTTTTGCATAGAGTTTCTCTCACCATTCTGAATCCCACCAAACAGAAGCACAGTGTTCCAAACAACACAAATTGGTTATTTAAACAAACTCTTAATATCAGTAGCCACAAATTGTGCATTATATCTACTGGCTGTGGAAGTCAAACCAtgtttaaaaacagtttacaCTCGACAGAAAAATCGAATAGTCACTTCAGTCTCGAACCCTCCAAGAAATTGAGATTTTGCGCGTTCTATAACAAGCATGCAATTTCTATATACAAACAAAG

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000136246

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00044857 lncRNA upstream 300482 33455563 ~ 33459265 (+) True XLOC_021820
TCONS_00044856 lncRNA upstream 1180313 32577050 ~ 32579434 (+) True XLOC_021815
TCONS_00044677 lncRNA upstream 1196933 32562610 ~ 32562814 (+) True XLOC_021814
TCONS_00044855 lncRNA upstream 1272021 32480330 ~ 32487726 (+) True XLOC_021812
TCONS_00043257 lncRNA upstream 1349820 32406356 ~ 32409927 (+) False XLOC_021810
TCONS_00043283 lncRNA downstream 218046 33978711 ~ 33983432 (+) True XLOC_021831
TCONS_00043285 lncRNA downstream 226790 33987455 ~ 33991280 (+) False XLOC_021832
TCONS_00043291 lncRNA downstream 278729 34039394 ~ 34043302 (+) True XLOC_021834
TCONS_00044859 lncRNA downstream 286751 34047416 ~ 34185014 (+) False XLOC_021835
TCONS_00044858 lncRNA downstream 286751 34047416 ~ 34185014 (+) False XLOC_021835
TCONS_00043273 mRNA upstream 2005 33752275 ~ 33757742 (+) True XLOC_021823
TCONS_00043272 mRNA upstream 30195 33718602 ~ 33729552 (+) True XLOC_021822
TCONS_00043269 mRNA upstream 315692 33383583 ~ 33444055 (+) False XLOC_021819
TCONS_00043270 mRNA upstream 315692 33413804 ~ 33444055 (+) True XLOC_021819
TCONS_00043267 mRNA upstream 450125 33296588 ~ 33309622 (+) True XLOC_021818
TCONS_00043275 mRNA downstream 16854 33777519 ~ 33901337 (+) True XLOC_021825
TCONS_00043277 mRNA downstream 147234 33907899 ~ 33928316 (+) True XLOC_021827
TCONS_00043278 mRNA downstream 173563 33934228 ~ 33951831 (+) False XLOC_021828
TCONS_00043279 mRNA downstream 187209 33947874 ~ 33953106 (+) True XLOC_021828
TCONS_00043280 mRNA downstream 196685 33957350 ~ 33961989 (+) True XLOC_021829
TCONS_00043271 other upstream 221578 33538051 ~ 33538169 (+) True XLOC_021821
TCONS_00043268 other upstream 338907 33381154 ~ 33420840 (+) False XLOC_021819
TCONS_00043266 other upstream 450162 33294633 ~ 33309585 (+) False XLOC_021818
TCONS_00043265 other upstream 469386 33290273 ~ 33290361 (+) True XLOC_021817
TCONS_00043264 other upstream 640623 33119010 ~ 33119124 (+) True XLOC_021816
TCONS_00043276 other downstream 68000 33828665 ~ 33830190 (+) True XLOC_021826
TCONS_00043288 other downstream 242092 34002757 ~ 34002873 (+) True XLOC_021833
TCONS_00043293 other downstream 286751 34047416 ~ 34053709 (+) False XLOC_021835
TCONS_00043296 other downstream 286898 34047563 ~ 34185009 (+) False XLOC_021835
TCONS_00043297 other downstream 292841 34053506 ~ 34185014 (+) True XLOC_021835

Expression Profile


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