Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00045289 |
| length | 660 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 5 |
| gene id | XLOC_022773 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007135.7 |
| NCBI id | CM002908.2 |
| chromosome length | 42172926 |
| location | 7741521 ~ 7746478 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006879 | cellular iron ion homeostasis | biological_process |
| GO:0006880 | intracellular sequestering of iron ion | biological_process |
| GO:0006826 | iron ion transport | biological_process |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0005506 | iron ion binding | molecular_function |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0008198 | ferrous iron binding | molecular_function |
| GO:0008199 | ferric iron binding | molecular_function |
| GO:0004322 | ferroxidase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-040426-1948 | Predicted to enable ferric iron binding activity and ferrous iron binding activity. Predicted to be involved in intracellular sequestering of iron ion. Predicted to act upstream of or within cellular iron ion homeostasis and iron ion transport. Predicted to be active in cytoplasm. |
| ensembl_id | ENSDART00000193229 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00046791 | lncRNA | upstream | 184309 | 7553299 ~ 7557890 (+) | False | XLOC_022770 |
| TCONS_00046793 | lncRNA | upstream | 184309 | 7554629 ~ 7557890 (+) | False | XLOC_022770 |
| TCONS_00046792 | lncRNA | upstream | 184309 | 7554629 ~ 7557890 (+) | True | XLOC_022770 |
| TCONS_00046932 | lncRNA | upstream | 1342414 | 6389435 ~ 6399785 (+) | True | XLOC_022764 |
| TCONS_00046931 | lncRNA | upstream | 1652946 | 6085433 ~ 6089253 (+) | True | XLOC_022761 |
| TCONS_00046933 | lncRNA | downstream | 496941 | 8243024 ~ 8245079 (+) | True | XLOC_022777 |
| TCONS_00046934 | lncRNA | downstream | 521500 | 8267583 ~ 8273614 (+) | False | XLOC_022778 |
| TCONS_00046935 | lncRNA | downstream | 521694 | 8267777 ~ 8273614 (+) | False | XLOC_022778 |
| TCONS_00046936 | lncRNA | downstream | 521705 | 8267788 ~ 8273614 (+) | False | XLOC_022778 |
| TCONS_00046937 | lncRNA | downstream | 521769 | 8267852 ~ 8295447 (+) | True | XLOC_022778 |
| TCONS_00045287 | mRNA | upstream | 27637 | 7708652 ~ 7714562 (+) | True | XLOC_022772 |
| TCONS_00045286 | mRNA | upstream | 74041 | 7637522 ~ 7668158 (+) | True | XLOC_022771 |
| TCONS_00045284 | mRNA | upstream | 74090 | 7631797 ~ 7668109 (+) | False | XLOC_022771 |
| TCONS_00045285 | mRNA | upstream | 103629 | 7637264 ~ 7638570 (+) | False | XLOC_022771 |
| TCONS_00045283 | mRNA | upstream | 194335 | 7536041 ~ 7547864 (+) | True | XLOC_022769 |
| TCONS_00045291 | mRNA | downstream | 36230 | 7782313 ~ 7811648 (+) | False | XLOC_022774 |
| TCONS_00045292 | mRNA | downstream | 54403 | 7800486 ~ 7816871 (+) | True | XLOC_022774 |
| TCONS_00045293 | mRNA | downstream | 82014 | 7828097 ~ 7854229 (+) | False | XLOC_022775 |
| TCONS_00045294 | mRNA | downstream | 82530 | 7828613 ~ 7853917 (+) | True | XLOC_022775 |
| TCONS_00045295 | mRNA | downstream | 115290 | 7861373 ~ 7935809 (+) | False | XLOC_022776 |
| TCONS_00045274 | other | upstream | 1160031 | 6582052 ~ 6582168 (+) | True | XLOC_022766 |
| TCONS_00045273 | other | upstream | 1336883 | 6405194 ~ 6405316 (+) | True | XLOC_022765 |
| TCONS_00045270 | other | upstream | 1678414 | 6063671 ~ 6063785 (+) | True | XLOC_022760 |
| TCONS_00045239 | other | upstream | 3585800 | 4154959 ~ 4156399 (+) | True | XLOC_022744 |
| TCONS_00045238 | other | upstream | 3682626 | 4059456 ~ 4059573 (+) | True | XLOC_022743 |
| TCONS_00045322 | other | downstream | 2000209 | 9746292 ~ 9866290 (+) | True | XLOC_022791 |
| TCONS_00045329 | other | downstream | 2491206 | 10237289 ~ 10270299 (+) | True | XLOC_022794 |
| TCONS_00045332 | other | downstream | 2557014 | 10303097 ~ 10319018 (+) | False | XLOC_022795 |
| TCONS_00045341 | other | downstream | 3071877 | 10817960 ~ 10818085 (+) | True | XLOC_022800 |
| TCONS_00045351 | other | downstream | 3818813 | 11564896 ~ 11566442 (+) | True | XLOC_022807 |
