Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036959603.1 |
| length | 795 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 4 |
| gene id | LOC110501756 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 31364542 ~ 31366811 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006470 | protein dephosphorylation | biological_process |
| GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2058288 | lncRNA | upstream | 49514 | 31313092 ~ 31315028 (+) | True | G1798615 |
| TU2058276 | lncRNA | upstream | 65309 | 31298367 ~ 31299233 (+) | True | G1798604 |
| TU2058271 | lncRNA | upstream | 73335 | 31289995 ~ 31291207 (+) | True | G1798600 |
| TU2058266 | lncRNA | upstream | 74876 | 31284091 ~ 31289666 (+) | True | G1798596 |
| TU2058218 | lncRNA | upstream | 172255 | 31191819 ~ 31192287 (+) | True | G1798551 |
| TU2058337 | lncRNA | downstream | 11408 | 31378219 ~ 31415967 (+) | True | G1798661 |
| TU2059262 | lncRNA | downstream | 136607 | 31503418 ~ 31552475 (+) | True | G1799506 |
| TU2059396 | lncRNA | downstream | 205438 | 31572249 ~ 31572454 (+) | True | G1799624 |
| TU2059402 | lncRNA | downstream | 216211 | 31583022 ~ 31583533 (+) | False | G1799630 |
| TU2059403 | lncRNA | downstream | 216417 | 31583228 ~ 31583964 (+) | True | G1799630 |
| XM_021579518.2 | mRNA | upstream | 97413 | 31249607 ~ 31267129 (+) | False | dnajc10 |
| XM_021579520.2 | mRNA | upstream | 97413 | 31249622 ~ 31267129 (+) | False | dnajc10 |
| XM_021579519.2 | mRNA | upstream | 97413 | 31249639 ~ 31267129 (+) | True | dnajc10 |
| XM_036959111.1 | mRNA | upstream | 127179 | 31206388 ~ 31237363 (+) | True | LOC110502091 |
| XM_021579510.2 | mRNA | upstream | 177144 | 31090277 ~ 31187398 (+) | False | LOC110501750 |
| XM_036959121.1 | mRNA | downstream | 91200 | 31458011 ~ 31535521 (+) | False | pde1a |
| XM_036959123.1 | mRNA | downstream | 95641 | 31462452 ~ 31535521 (+) | False | pde1a |
| XM_036959122.1 | mRNA | downstream | 124637 | 31491448 ~ 31535521 (+) | True | pde1a |
| XM_021579534.2 | mRNA | downstream | 268699 | 31635510 ~ 31638598 (+) | True | neurod1 |
| XR_005038821.1 | mRNA | downstream | 277609 | 31644420 ~ 31736964 (+) | False | cerkl |
| TU2058268 | other | upstream | 67123 | 31293552 ~ 31297419 (+) | True | G1798597 |
| TU2058247 | other | upstream | 72337 | 31246481 ~ 31292205 (+) | True | G1798579 |
| TU2058046 | other | upstream | 473475 | 30888661 ~ 30891067 (+) | False | G1798397 |
| TU2058047 | other | upstream | 473475 | 30888661 ~ 30891067 (+) | False | G1798397 |
| TU2058048 | other | upstream | 473475 | 30888661 ~ 30891067 (+) | False | G1798397 |
| TU2059894 | other | downstream | 1000825 | 32367636 ~ 32374181 (+) | True | LOC110501767 |
| TU2060607 | other | downstream | 1543982 | 32910793 ~ 32914182 (+) | True | G1800754 |
| TU2064746 | other | downstream | 4373628 | 35740439 ~ 35759426 (+) | False | LOC110501795 |
| TU2064995 | other | downstream | 4507751 | 35874562 ~ 35875452 (+) | True | G1804873 |
| TU2065354 | other | downstream | 4996785 | 36363596 ~ 36363930 (+) | True | G1805191 |
