RNA id: TCONS_00051424


Basic Information

Item Value
RNA id TCONS_00051424
length 117
RNA type rRNA
GC content 0.49
exon number 1
gene id XLOC_026381
representative True

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 27083298 ~ 27083414 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TTGActagccatatcaccctgcagcctaatactggttactcactgaagctaagcagagctgagcttggtcattacctggatgggagaccacgtgggaaaactaggttgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000176176

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00051418 lncRNA downstream 16779 27058480 ~ 27066519 (-) False XLOC_026380
TCONS_00051416 lncRNA downstream 25263 27045647 ~ 27058035 (-) True XLOC_026379
TCONS_00052461 lncRNA downstream 81891 27000787 ~ 27001407 (-) True XLOC_026378
TCONS_00052460 lncRNA downstream 402877 26663733 ~ 26680421 (-) True XLOC_026372
TCONS_00053032 lncRNA downstream 436665 26634990 ~ 26646633 (-) True XLOC_026370
TCONS_00051425 lncRNA upstream 205329 27288743 ~ 27290780 (-) True XLOC_026382
TCONS_00053033 lncRNA upstream 324859 27408273 ~ 27442432 (-) False XLOC_026383
TCONS_00053034 lncRNA upstream 324859 27408273 ~ 27442493 (-) True XLOC_026383
TCONS_00051427 lncRNA upstream 516240 27599654 ~ 27600301 (-) False XLOC_026384
TCONS_00053035 lncRNA upstream 693948 27777362 ~ 27783292 (-) True XLOC_026387
TCONS_00051422 mRNA downstream 11119 27059279 ~ 27072179 (-) False XLOC_026380
TCONS_00051417 mRNA downstream 16764 27058461 ~ 27066534 (-) False XLOC_026380
TCONS_00051421 mRNA downstream 16847 27058913 ~ 27066451 (-) False XLOC_026380
TCONS_00051419 mRNA downstream 17821 27058649 ~ 27065477 (-) False XLOC_026380
TCONS_00051420 mRNA downstream 21661 27058888 ~ 27061637 (-) False XLOC_026380
TCONS_00051426 mRNA upstream 511623 27595037 ~ 27601812 (-) False XLOC_026384
TCONS_00051428 mRNA upstream 516264 27599678 ~ 27601544 (-) True XLOC_026384
TCONS_00051429 mRNA upstream 558972 27642386 ~ 27647845 (-) False XLOC_026385
TCONS_00051430 mRNA upstream 559846 27643260 ~ 27646076 (-) False XLOC_026385
TCONS_00051432 mRNA upstream 559973 27643387 ~ 27646070 (-) True XLOC_026385
TCONS_00051423 other downstream 17178 27065385 ~ 27066120 (-) True XLOC_026380
TCONS_00051408 other downstream 420133 26663048 ~ 26663165 (-) True XLOC_026371
TCONS_00051368 other downstream 1807947 25274142 ~ 25275351 (-) True XLOC_026342
TCONS_00051354 other downstream 1996347 25079449 ~ 25086951 (-) True XLOC_026336
TCONS_00051348 other downstream 2337417 24745766 ~ 24745881 (-) True XLOC_026332
TCONS_00051431 other upstream 559942 27643356 ~ 27647823 (-) False XLOC_026385
TCONS_00051457 other upstream 1775870 28859284 ~ 28859400 (-) True XLOC_026403
TCONS_00051462 other upstream 2168535 29251949 ~ 29252065 (-) True XLOC_026406
TCONS_00051465 other upstream 2469227 29552641 ~ 29552762 (-) True XLOC_026409
TCONS_00051466 other upstream 2571547 29654961 ~ 29663743 (-) False XLOC_026411