RNA id: TCONS_00051474


Basic Information

Item Value
RNA id TCONS_00051474
length 117
RNA type rRNA
GC content 0.55
exon number 1
gene id XLOC_026414
representative True

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 29770142 ~ 29770258 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GTTGagagctagctctctgcaactgtcACATGGCCGCCCACTGGAGTTAAGCAGGGATGTGCCCAGTCaatacctggataggagaccacaagGGAAAGCTACAGGTTGCTGCCGGTA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000178651

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00051473 lncRNA downstream 52997 29713211 ~ 29717145 (-) True XLOC_026413
TCONS_00052470 lncRNA downstream 144207 29624097 ~ 29625935 (-) False XLOC_026410
TCONS_00052468 lncRNA downstream 144516 29623488 ~ 29625626 (-) False XLOC_026410
TCONS_00052469 lncRNA downstream 144566 29624097 ~ 29625576 (-) False XLOC_026410
TCONS_00052471 lncRNA downstream 144935 29624295 ~ 29625207 (-) True XLOC_026410
TCONS_00053043 lncRNA upstream 64907 29835165 ~ 29856468 (-) False XLOC_026415
TCONS_00051476 lncRNA upstream 64907 29835165 ~ 29863585 (-) False XLOC_026415
TCONS_00051475 lncRNA upstream 64907 29835165 ~ 29863604 (-) False XLOC_026415
TCONS_00053045 lncRNA upstream 64907 29835165 ~ 29863606 (-) False XLOC_026415
TCONS_00053044 lncRNA upstream 64907 29835165 ~ 29863606 (-) True XLOC_026415
TCONS_00051469 mRNA downstream 81743 29674308 ~ 29688399 (-) False XLOC_026412
TCONS_00051471 mRNA downstream 81772 29686639 ~ 29688370 (-) False XLOC_026412
TCONS_00051470 mRNA downstream 90671 29674628 ~ 29679471 (-) False XLOC_026412
TCONS_00051467 mRNA downstream 98489 29655677 ~ 29671653 (-) False XLOC_026411
TCONS_00051463 mRNA downstream 261183 29487300 ~ 29508959 (-) False XLOC_026408
TCONS_00051477 mRNA upstream 96955 29867213 ~ 29871364 (-) False XLOC_026416
TCONS_00051478 mRNA upstream 97028 29867286 ~ 29870848 (-) False XLOC_026416
TCONS_00051480 mRNA upstream 97724 29867982 ~ 29869120 (-) False XLOC_026416
TCONS_00051483 mRNA upstream 102561 29872819 ~ 29891500 (-) False XLOC_026419
TCONS_00051484 mRNA upstream 110272 29880530 ~ 29891456 (-) False XLOC_026419
TCONS_00051472 other downstream 82379 29686709 ~ 29687763 (-) True XLOC_026412
TCONS_00051468 other downstream 106379 29655732 ~ 29663763 (-) True XLOC_026411
TCONS_00051466 other downstream 106399 29654961 ~ 29663743 (-) False XLOC_026411
TCONS_00051465 other downstream 217380 29552641 ~ 29552762 (-) True XLOC_026409
TCONS_00051462 other downstream 518077 29251949 ~ 29252065 (-) True XLOC_026406
TCONS_00051479 other upstream 97146 29867404 ~ 29867540 (-) True XLOC_026417
TCONS_00051481 other upstream 98377 29868635 ~ 29868732 (-) True XLOC_026418
TCONS_00051482 other upstream 98641 29868899 ~ 29870124 (-) True XLOC_026416
TCONS_00051520 other upstream 684095 30454353 ~ 30488094 (-) False XLOC_026436
TCONS_00051529 other upstream 1030283 30800541 ~ 30800658 (-) True XLOC_026441