Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2483665 |
| length | 971 |
| lncRNA type | sense_over |
| GC content | 0.36 |
| exon number | 1 |
| gene id | LOC110509968 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 29633391 ~ 29637493 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006486 | protein glycosylation | biological_process |
| GO:0005794 | Golgi apparatus | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0008378 | galactosyltransferase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2483657 | lncRNA | upstream | 2641 | 29628024 ~ 29632232 (+) | True | G2173109 |
| TU2483663 | lncRNA | upstream | 5347 | 29626559 ~ 29629526 (+) | False | G2173109 |
| TU2483684 | lncRNA | upstream | 27028 | 29606747 ~ 29607845 (+) | True | G2173120 |
| TU2483681 | lncRNA | upstream | 40582 | 29591963 ~ 29594291 (+) | True | G2173117 |
| TU2483675 | lncRNA | upstream | 47401 | 29585594 ~ 29587472 (+) | True | G2173114 |
| TU2483966 | lncRNA | downstream | 15487 | 29651330 ~ 29651986 (+) | True | G2173363 |
| TU2483967 | lncRNA | downstream | 16171 | 29652014 ~ 29652226 (+) | True | G2173364 |
| TU2483995 | lncRNA | downstream | 85341 | 29721184 ~ 29722775 (+) | True | G2173388 |
| TU2484007 | lncRNA | downstream | 103820 | 29739663 ~ 29739868 (+) | True | LOC110509406 |
| TU2484011 | lncRNA | downstream | 107417 | 29743260 ~ 29743543 (+) | True | G2173401 |
| XM_021591216.2 | mRNA | upstream | 10593 | 29610727 ~ 29624280 (+) | True | LOC110509967 |
| XM_021591204.2 | mRNA | upstream | 61429 | 29570335 ~ 29573444 (+) | True | LOC110509964 |
| XR_005040535.1 | mRNA | upstream | 137588 | 29487508 ~ 29497285 (+) | True | LOC118945365 |
| XM_021591202.2 | mRNA | upstream | 197811 | 29433858 ~ 29437062 (+) | True | LOC110509962 |
| XM_036967814.1 | mRNA | upstream | 207005 | 29325241 ~ 29427868 (+) | True | LOC110509959 |
| XM_021591218.2 | mRNA | downstream | 2725 | 29638568 ~ 29645471 (+) | True | LOC110509969 |
| XM_021591219.2 | mRNA | downstream | 16675 | 29652518 ~ 29662236 (+) | False | LOC110509970 |
| XM_021591226.2 | mRNA | downstream | 30827 | 29666670 ~ 29675086 (+) | False | LOC110509973 |
| XM_021591223.2 | mRNA | downstream | 30831 | 29666674 ~ 29675086 (+) | False | LOC110509973 |
| XM_021591224.2 | mRNA | downstream | 30834 | 29666677 ~ 29675086 (+) | False | LOC110509973 |
| TU2483674 | other | upstream | 47401 | 29585594 ~ 29587472 (+) | False | G2173114 |
| TU2483638 | other | upstream | 74914 | 29559570 ~ 29559959 (+) | True | G2173098 |
| TU2482435 | other | upstream | 955196 | 28678848 ~ 28679677 (+) | True | LOC110509373 |
| TU2482164 | other | upstream | 1321722 | 28303205 ~ 28313151 (+) | True | gigyf1b |
| TU2480666 | other | upstream | 2310108 | 27322105 ~ 27324765 (+) | False | G2170458 |
| TU2483968 | other | downstream | 16726 | 29652569 ~ 29662234 (+) | True | LOC110509970 |
| TU2484185 | other | downstream | 233295 | 29869138 ~ 29871317 (+) | False | LOC110509988 |
| TU2484176 | other | downstream | 258251 | 29894094 ~ 29896279 (+) | True | G2173551 |
| TU2484191 | other | downstream | 316694 | 29952537 ~ 29953810 (+) | True | LOC110509998 |
| TU2484310 | other | downstream | 500880 | 30136723 ~ 30137320 (+) | True | G2173675 |
