Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00005478 |
| length | 1466 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 8 |
| gene id | XLOC_002972 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 39028331 ~ 39091894 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-091204-182 | Predicted to act upstream of or within cell-cell adhesion. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human IGSF5 (immunoglobulin superfamily member 5). |
| ensembl_id | ENSDART00000144036 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00005778 | lncRNA | downstream | 366541 | 38663993 ~ 38664234 (-) | True | XLOC_002970 |
| TCONS_00005474 | lncRNA | downstream | 504065 | 38511908 ~ 38526710 (-) | True | XLOC_002969 |
| TCONS_00006121 | lncRNA | downstream | 515244 | 38511908 ~ 38515531 (-) | False | XLOC_002969 |
| TCONS_00006120 | lncRNA | downstream | 599680 | 38412930 ~ 38431095 (-) | False | XLOC_002967 |
| TCONS_00006119 | lncRNA | downstream | 600117 | 38412930 ~ 38430658 (-) | False | XLOC_002967 |
| TCONS_00006122 | lncRNA | upstream | 35061 | 39087325 ~ 39090088 (-) | True | XLOC_002973 |
| TCONS_00005520 | lncRNA | upstream | 1437373 | 40489637 ~ 40490637 (-) | True | XLOC_003004 |
| TCONS_00005521 | lncRNA | upstream | 1445895 | 40498159 ~ 40499209 (-) | True | XLOC_003005 |
| TCONS_00005779 | lncRNA | upstream | 1568717 | 40620981 ~ 40621955 (-) | True | XLOC_003023 |
| TCONS_00006123 | lncRNA | upstream | 1798873 | 40851137 ~ 40857097 (-) | True | XLOC_003028 |
| TCONS_00005475 | mRNA | downstream | 19261 | 38969429 ~ 39011514 (-) | True | XLOC_002971 |
| TCONS_00005470 | mRNA | downstream | 532703 | 38430359 ~ 38498072 (-) | False | XLOC_002967 |
| TCONS_00005473 | mRNA | downstream | 561928 | 38448274 ~ 38468847 (-) | True | XLOC_002967 |
| TCONS_00005469 | mRNA | downstream | 574393 | 38430359 ~ 38456382 (-) | False | XLOC_002967 |
| TCONS_00005479 | mRNA | upstream | 73373 | 39125637 ~ 39130935 (-) | False | XLOC_002974 |
| TCONS_00005480 | mRNA | upstream | 73375 | 39125639 ~ 39130839 (-) | True | XLOC_002974 |
| TCONS_00005481 | mRNA | upstream | 81146 | 39133410 ~ 39154778 (-) | False | XLOC_002975 |
| TCONS_00005482 | mRNA | upstream | 83842 | 39136106 ~ 39153997 (-) | False | XLOC_002975 |
| TCONS_00005483 | mRNA | upstream | 91648 | 39143912 ~ 39153959 (-) | False | XLOC_002975 |
| TCONS_00005472 | other | downstream | 596276 | 38434383 ~ 38434499 (-) | True | XLOC_002968 |
| TCONS_00005468 | other | downstream | 654522 | 38376134 ~ 38376253 (-) | True | XLOC_002966 |
| TCONS_00005467 | other | downstream | 714705 | 38290887 ~ 38316070 (-) | False | XLOC_002965 |
| TCONS_00005463 | other | downstream | 956384 | 38074312 ~ 38074391 (-) | True | XLOC_002962 |
| TCONS_00005461 | other | downstream | 958607 | 38072077 ~ 38072168 (-) | True | XLOC_002963 |
| TCONS_00005497 | other | upstream | 1322746 | 40375010 ~ 40375996 (-) | True | XLOC_002983 |
| TCONS_00005499 | other | upstream | 1331518 | 40383782 ~ 40384432 (-) | True | XLOC_002985 |
| TCONS_00005503 | other | upstream | 1351730 | 40403994 ~ 40404331 (-) | True | XLOC_002989 |
| TCONS_00005507 | other | upstream | 1366543 | 40418807 ~ 40419059 (-) | True | XLOC_002993 |
| TCONS_00005514 | other | upstream | 1416108 | 40468372 ~ 40469394 (-) | True | XLOC_003000 |
