Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00065519 |
| length | 1505 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 7 |
| gene id | XLOC_033479 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007118.7 |
| NCBI id | CM002891.2 |
| chromosome length | 74282399 |
| location | 10562118 ~ 10583151 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006625 | protein targeting to peroxisome | biological_process |
| GO:0005575 | cellular_component | cellular_component |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0031593 | polyubiquitin modification-dependent protein binding | molecular_function |
| GO:0003677 | DNA binding | molecular_function |
| GO:0008270 | zinc ion binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-030131-8405 | Predicted to enable polyubiquitin modification-dependent protein binding activity. Predicted to be involved in protein targeting to peroxisome. Orthologous to human ZFAND6 (zinc finger AN1-type containing 6). |
| ensembl_id | ENSDART00000168801 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00068780 | lncRNA | upstream | 507913 | 10053343 ~ 10054205 (+) | True | XLOC_033476 |
| TCONS_00068553 | lncRNA | upstream | 1005473 | 9556044 ~ 9556645 (+) | True | XLOC_033472 |
| TCONS_00065504 | lncRNA | upstream | 1256537 | 9299640 ~ 9305581 (+) | False | XLOC_033469 |
| TCONS_00065505 | lncRNA | upstream | 1256537 | 9302610 ~ 9305581 (+) | True | XLOC_033469 |
| TCONS_00068552 | lncRNA | upstream | 1498737 | 9061425 ~ 9063381 (+) | True | XLOC_033467 |
| TCONS_00068555 | lncRNA | downstream | 84320 | 10667471 ~ 10681656 (+) | True | XLOC_033481 |
| TCONS_00065526 | lncRNA | downstream | 118581 | 10701732 ~ 10800887 (+) | False | XLOC_033483 |
| TCONS_00065529 | lncRNA | downstream | 149260 | 10732411 ~ 10800886 (+) | False | XLOC_033483 |
| TCONS_00068781 | lncRNA | downstream | 183314 | 10766465 ~ 10800876 (+) | False | XLOC_033483 |
| TCONS_00065530 | lncRNA | downstream | 183367 | 10766518 ~ 10780625 (+) | True | XLOC_033483 |
| TCONS_00065517 | mRNA | upstream | 189615 | 10351038 ~ 10372503 (+) | True | XLOC_033478 |
| TCONS_00065515 | mRNA | upstream | 304925 | 9981757 ~ 10257193 (+) | False | XLOC_033475 |
| TCONS_00065514 | mRNA | upstream | 304925 | 9981757 ~ 10257193 (+) | True | XLOC_033475 |
| TCONS_00065513 | mRNA | upstream | 614862 | 9922607 ~ 9947256 (+) | True | XLOC_033474 |
| TCONS_00065512 | mRNA | upstream | 617037 | 9922607 ~ 9945081 (+) | False | XLOC_033474 |
| TCONS_00065523 | mRNA | downstream | 9001 | 10592152 ~ 10632368 (+) | False | XLOC_033480 |
| TCONS_00065524 | mRNA | downstream | 27640 | 10610791 ~ 10632375 (+) | True | XLOC_033480 |
| TCONS_00065527 | mRNA | downstream | 118619 | 10701770 ~ 10877536 (+) | False | XLOC_033483 |
| TCONS_00065528 | mRNA | downstream | 118787 | 10701938 ~ 10873289 (+) | False | XLOC_033483 |
| TCONS_00065531 | mRNA | downstream | 328245 | 10911396 ~ 10966477 (+) | False | XLOC_033484 |
| TCONS_00065516 | other | upstream | 313931 | 10248072 ~ 10248187 (+) | True | XLOC_033477 |
| TCONS_00065503 | other | upstream | 1256537 | 9290965 ~ 9305581 (+) | False | XLOC_033469 |
| TCONS_00065500 | other | upstream | 1515816 | 9041175 ~ 9046302 (+) | True | XLOC_033466 |
| TCONS_00065497 | other | upstream | 1880937 | 8670465 ~ 8681181 (+) | True | XLOC_033464 |
| TCONS_00065492 | other | upstream | 2132199 | 8428954 ~ 8429919 (+) | True | XLOC_033460 |
| TCONS_00065525 | other | downstream | 100336 | 10683487 ~ 10683607 (+) | True | XLOC_033482 |
| TCONS_00065536 | other | downstream | 630257 | 11213408 ~ 11213524 (+) | True | XLOC_033487 |
| TCONS_00065544 | other | downstream | 1588978 | 12172129 ~ 12172246 (+) | True | XLOC_033493 |
| TCONS_00065547 | other | downstream | 2269952 | 12853103 ~ 12853217 (+) | True | XLOC_033496 |
| TCONS_00065558 | other | downstream | 2756992 | 13340143 ~ 13340268 (+) | True | XLOC_033501 |
