Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU3667 |
| length | 548 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 2 |
| gene id | G2620 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053112.1 |
| NCBI id | CM020909.1 |
| chromosome length | 48724115 |
| location | 8249512 ~ 8250570 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0038023 | signaling receptor activity | molecular_function |
| GO:0060089 | molecular transducer activity | molecular_function |
| GO:0004888 | transmembrane signaling receptor activity | molecular_function |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU3682 | lncRNA | upstream | 7961 | 8240740 ~ 8241551 (+) | False | G2630 |
| TU3598 | lncRNA | upstream | 53527 | 8071607 ~ 8195985 (+) | True | G2580 |
| TU3597 | lncRNA | upstream | 53592 | 8071607 ~ 8195920 (+) | False | G2580 |
| TU3684 | lncRNA | downstream | 709 | 8251279 ~ 8288967 (+) | True | G2631 |
| TU3677 | lncRNA | downstream | 1378 | 8251948 ~ 8253099 (+) | False | G2628 |
| TU3659 | lncRNA | downstream | 38026 | 8288596 ~ 8297950 (+) | False | G2614 |
| TU3700 | lncRNA | downstream | 39326 | 8289896 ~ 8439252 (+) | True | G2646 |
| TU3745 | lncRNA | downstream | 209517 | 8460087 ~ 8463648 (+) | False | G2685 |
| XM_039800295.1 | mRNA | upstream | 34471 | 8211071 ~ 8215041 (+) | True | LOC120558930 |
| XM_039800252.1 | mRNA | upstream | 134318 | 8109343 ~ 8115194 (+) | True | LOC120558905 |
| XM_039804264.1 | mRNA | upstream | 185012 | 8052523 ~ 8064500 (+) | True | ccsapa |
| XM_039804272.1 | mRNA | upstream | 185012 | 8052523 ~ 8064500 (+) | False | ccsapa |
| XM_039804256.1 | mRNA | upstream | 200125 | 8038319 ~ 8049387 (+) | True | acta1a |
| XM_039800189.1 | mRNA | downstream | 122287 | 8372857 ~ 8380700 (+) | True | LOC120558872 |
| XM_039811024.1 | mRNA | downstream | 151145 | 8401715 ~ 8415076 (+) | True | LOC120565323 |
| XM_039803257.1 | mRNA | downstream | 312478 | 8563048 ~ 8575327 (+) | True | mrpl45 |
| XM_039816351.1 | mRNA | downstream | 366813 | 8617383 ~ 8643702 (+) | True | socs7 |
| XM_039816357.1 | mRNA | downstream | 366813 | 8617383 ~ 8643702 (+) | False | socs7 |
| TU3609 | other | upstream | 158007 | 8089813 ~ 8091505 (+) | True | G2590 |
| TU3574 | other | upstream | 301259 | 7941547 ~ 7948253 (+) | True | G2557 |
| TU3532 | other | upstream | 549972 | 7699265 ~ 7699540 (+) | True | G2530 |
| unassigned_transcript_51 | other | upstream | 1035956 | 7213485 ~ 7213556 (+) | True | trnae-uuc_49 |
| unassigned_transcript_50 | other | upstream | 1036478 | 7212963 ~ 7213034 (+) | True | trnae-uuc_48 |
| TU3639 | other | downstream | 159287 | 8409857 ~ 8410935 (+) | False | LOC120565323 |
| TU4189 | other | downstream | 640878 | 8891448 ~ 8893493 (+) | False | zbtb45 |
| TU4342 | other | downstream | 1221530 | 9472100 ~ 9527214 (+) | False | G3091 |
| TU4305 | other | downstream | 1241739 | 9492309 ~ 9501129 (+) | False | LOC120559285 |
| TU4435 | other | downstream | 1521005 | 9771575 ~ 9772935 (+) | True | G3148 |
