Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00066087 |
| length | 1464 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 13 |
| gene id | XLOC_033782 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007118.7 |
| NCBI id | CM002891.2 |
| chromosome length | 74282399 |
| location | 29080684 ~ 29094305 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0051973 | positive regulation of telomerase activity | biological_process |
| GO:0007507 | heart development | biological_process |
| GO:0043066 | negative regulation of apoptotic process | biological_process |
| GO:0016233 | telomere capping | biological_process |
| GO:0032211 | negative regulation of telomere maintenance via telomerase | biological_process |
| GO:0000723 | telomere maintenance | biological_process |
| GO:0070198 | protein localization to chromosome, telomeric region | biological_process |
| GO:0000783 | nuclear telomere cap complex | cellular_component |
| GO:0070187 | shelterin complex | cellular_component |
| GO:0005515 | protein binding | molecular_function |
| GO:0042162 | telomeric DNA binding | molecular_function |
| id | description |
|---|---|
| ko00071 | Fatty acid degradation |
| ko00280 | Valine, leucine and isoleucine degradation |
| ko00362 | Benzoate degradation |
| ko03320 | PPAR signaling pathway |
| ko03032 | DNA replication proteins |
| id | description |
|---|---|
| ZDB-GENE-081022-45 | Enables telomeric DNA binding activity. Acts upstream of or within heart development and negative regulation of apoptotic process. Predicted to be located in chromosome, telomeric region and nucleus. Predicted to be part of shelterin complex. Human ortholog(s) of this gene implicated in autosomal dominant dyskeratosis congenita 6. Orthologous to human ACD (ACD shelterin complex subunit and telomerase recruitment factor). |
| ensembl_id | ENSDART00000173576 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00068576 | lncRNA | upstream | 16355 | 29062175 ~ 29064397 (+) | True | XLOC_033780 |
| TCONS_00066064 | lncRNA | upstream | 891071 | 28058202 ~ 28189681 (+) | True | XLOC_033767 |
| TCONS_00068575 | lncRNA | upstream | 991735 | 28058202 ~ 28089017 (+) | False | XLOC_033767 |
| TCONS_00068860 | lncRNA | upstream | 1248429 | 27825631 ~ 27832323 (+) | False | XLOC_033764 |
| TCONS_00066099 | lncRNA | downstream | 88247 | 29182076 ~ 29182727 (+) | True | XLOC_033789 |
| TCONS_00068862 | lncRNA | downstream | 184738 | 29278567 ~ 29280954 (+) | True | XLOC_033790 |
| TCONS_00068577 | lncRNA | downstream | 367536 | 29461365 ~ 29462263 (+) | True | XLOC_033793 |
| TCONS_00068578 | lncRNA | downstream | 373309 | 29467138 ~ 29467407 (+) | True | XLOC_033794 |
| TCONS_00068863 | lncRNA | downstream | 466739 | 29560568 ~ 29631080 (+) | True | XLOC_033797 |
| TCONS_00066085 | mRNA | upstream | 196 | 29065915 ~ 29080556 (+) | True | XLOC_033781 |
| TCONS_00066084 | mRNA | upstream | 18595 | 29053239 ~ 29062157 (+) | True | XLOC_033779 |
| TCONS_00066083 | mRNA | upstream | 19113 | 29053217 ~ 29061639 (+) | False | XLOC_033779 |
| TCONS_00066082 | mRNA | upstream | 28284 | 29044888 ~ 29052468 (+) | True | XLOC_033778 |
| TCONS_00066081 | mRNA | upstream | 40045 | 29024282 ~ 29040707 (+) | True | XLOC_033777 |
| TCONS_00066089 | mRNA | downstream | 2365 | 29096194 ~ 29110094 (+) | True | XLOC_033783 |
| TCONS_00066090 | mRNA | downstream | 22061 | 29115890 ~ 29124578 (+) | True | XLOC_033784 |
| TCONS_00066091 | mRNA | downstream | 39492 | 29133321 ~ 29144547 (+) | False | XLOC_033785 |
| TCONS_00066093 | mRNA | downstream | 54885 | 29148714 ~ 29149228 (+) | True | XLOC_033786 |
| TCONS_00066094 | mRNA | downstream | 59189 | 29153018 ~ 29161923 (+) | True | XLOC_033787 |
| TCONS_00066080 | other | upstream | 65584 | 29014139 ~ 29015168 (+) | True | XLOC_033776 |
| TCONS_00066070 | other | upstream | 347232 | 28724910 ~ 28733520 (+) | False | XLOC_033772 |
| TCONS_00066067 | other | upstream | 619174 | 28461463 ~ 28461578 (+) | True | XLOC_033770 |
| TCONS_00066066 | other | upstream | 822126 | 28255096 ~ 28258626 (+) | True | XLOC_033769 |
| TCONS_00066065 | other | upstream | 825575 | 28253644 ~ 28255177 (+) | False | XLOC_033769 |
| TCONS_00066092 | other | downstream | 39575 | 29133404 ~ 29140443 (+) | True | XLOC_033785 |
| TCONS_00066097 | other | downstream | 83095 | 29176924 ~ 29182744 (+) | False | XLOC_033789 |
| TCONS_00066103 | other | downstream | 409045 | 29502874 ~ 29506131 (+) | False | XLOC_033795 |
| TCONS_00066104 | other | downstream | 409402 | 29503231 ~ 29505187 (+) | False | XLOC_033795 |
| TCONS_00066105 | other | downstream | 409726 | 29503555 ~ 29506147 (+) | True | XLOC_033795 |
