RNA id: TCONS_00067337


Basic Information

Item Value
RNA id TCONS_00067337
length 1502
lncRNA type lincRNA
GC content 0.41
exon number 3
gene id XLOC_034582
representative True

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 16075216 ~ 16149267 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

agttattagagatgagttaaaaaaatctctcacaattggggaaaaaataaacaggggggagggggtaataattcaggggggctaataattctgacttcaactgtattaacaGTGCTATTGGACACAAATGAAGAAAGGTATACTGTACAGTAAAAAAATGCATACagcacaaaaacagcattacataatatggatgtcaatgtctgctggttttcaacattcgtcagaatatcttcttttgttttcaacaaaagaaagacatCCATATTTTAGAACCAGCTGAGTGTGAGGCAACGATGAGGAAagttaaatttttgggtgaaccatccctttttaatacaaaaaaaaaaaaaaaaaaaaaaaaaactcatctttatttttttctactactGTGTTTTTACTTAGGCCTATTGATCTGATAACAACGTCTCCTTTTCTCTTCATATCTCTTTACTTCTTATATCTAAAAGTAAGGCAAATCAAGAGCCATATAGTGGACTGCTAATAGTATTACTTCCGTTTTGCTATTGAACCCCATTTATTGTCTCAGAGGTCTCACACCTCGTTTGTTATTATGTAGGCTTGCTGAATTGTTTTTTTCGCGTTCACGCAACGACAAGCAGAGCATGTAAATCAGGGCGAGATCCTCCGATTAAACACGTTTCTGATCATTGTTAAGCGATAGCAGCACATCTGGAGTGAAGTGCAGGAATCAGCGACTGTGTGTGTCAAACTTCAACCTCGCGATTTAACACGAGCTGCTAATGAGTCGTAGAGTGTTATTGTGAAATTGCATTAAACGCCACGACATGCAAGAGGATAATTGAGTAACACAGCGGCAAACTGCGGTTGTGCTCtgttttttaacaataaacaagGAATGGAGCAATATAAACAGCATTTGGATTAAGTTAATGGCAGTCACAGCGCTCTGGGGCTCTGGAGGTATTTCAGAAAAATCAGAGAAATCAATCCAACATGAAACTGAAGGAAAACATCTAATGTCATTGAGCAATAACTCGCTCCTGCTCTCCTGTCAACGTGGAACCTTAGAGCGAGAGCCTAGGCTCGTGTGCTTCTCTTGGCTCATTCTCTGCTCAAACCCATATGCCGTTCACCGTTCACCACATCTGAACCGGAGCAGACCCACAAACCAACGATCACCCCAGCTCCTCTCATTTCACTGGGCTTCGCCGCGGCCCACCAGGCTCTTGGAAGATTGATGATCCGTCGGTGCGATGCCACTATGCCAGATTTGCTGAAGGTCTGGATTCATTGGTCTGGTAAAGGAAGGGCAGGAATAGCTGGGAAATTTGGCATCACTTTGGGCTTTATTCAGTAGTTGGGCCAGCAGTGCTGGAGAGACACTCATGCATGTCAGCCCAAACAACTGCTGCCAAACACAACCAGATGATGATTTCATTTTGGAGAACAAGAACACCTTTCGGGAAGGGTGTGTGATAATTAGAATTAACTTGAATTAAACTTATATTAAGCATTCA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000194458

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00069166 lncRNA downstream 185399 15896968 ~ 15900453 (-) True XLOC_034580
TCONS_00067333 lncRNA downstream 259465 15819578 ~ 15826387 (-) True XLOC_034579
TCONS_00069165 lncRNA downstream 475591 15603053 ~ 15610261 (-) False XLOC_034578
TCONS_00069164 lncRNA downstream 475591 15603053 ~ 15610261 (-) True XLOC_034578
TCONS_00067327 lncRNA downstream 833411 15214910 ~ 15252441 (-) False XLOC_034575
TCONS_00068671 lncRNA upstream 23303 16172570 ~ 16174329 (-) True XLOC_034584
TCONS_00068672 lncRNA upstream 72778 16222045 ~ 16223104 (-) True XLOC_034589
TCONS_00069167 lncRNA upstream 198233 16347500 ~ 16349089 (-) False XLOC_034591
TCONS_00069168 lncRNA upstream 1073270 17222537 ~ 17255612 (-) False XLOC_034596
TCONS_00069169 lncRNA upstream 1101935 17251202 ~ 17255611 (-) False XLOC_034596
TCONS_00067334 mRNA downstream 51528 15905691 ~ 16034324 (-) False XLOC_034581
TCONS_00067335 mRNA downstream 51528 15912255 ~ 16034324 (-) True XLOC_034581
TCONS_00067332 mRNA downstream 255601 15818778 ~ 15830251 (-) False XLOC_034579
TCONS_00067331 mRNA downstream 672664 15378254 ~ 15413188 (-) True XLOC_034577
TCONS_00067330 mRNA downstream 672833 15373412 ~ 15413019 (-) False XLOC_034577
TCONS_00067340 mRNA upstream 36109 16185376 ~ 16195144 (-) False XLOC_034586
TCONS_00067341 mRNA upstream 40190 16189457 ~ 16194952 (-) True XLOC_034586
TCONS_00067342 mRNA upstream 47636 16196903 ~ 16204885 (-) False XLOC_034587
TCONS_00067343 mRNA upstream 49130 16198397 ~ 16205471 (-) True XLOC_034587
TCONS_00067344 mRNA upstream 56342 16205609 ~ 16214891 (-) False XLOC_034588
TCONS_00067317 other downstream 1635232 14450524 ~ 14450620 (-) True XLOC_034571
TCONS_00067316 other downstream 1690495 14394515 ~ 14395357 (-) True XLOC_034570
TCONS_00067314 other downstream 1706221 14379544 ~ 14379631 (-) True XLOC_034569
TCONS_00067312 other downstream 1990941 14094794 ~ 14094911 (-) True XLOC_034567
TCONS_00067306 other downstream 2633463 13452269 ~ 13452389 (-) True XLOC_034560
TCONS_00067339 other upstream 27580 16176847 ~ 16181592 (-) True XLOC_034585
TCONS_00067347 other upstream 199472 16348739 ~ 16349432 (-) True XLOC_034591
TCONS_00067355 other upstream 692732 16841999 ~ 16842116 (-) True XLOC_034594
TCONS_00067360 other upstream 1112349 17261616 ~ 17264309 (-) True XLOC_034597
TCONS_00067372 other upstream 1266121 17415388 ~ 17416092 (-) False XLOC_034602

Expression Profile

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