RNA id: TCONS_00067338


Basic Information

Item Value
RNA id TCONS_00067338
length 129
RNA type rRNA
GC content 0.55
exon number 1
gene id XLOC_034583
representative True

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 16114300 ~ 16114428 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TGCCACAGCCACATCACTCTGCAGCcccagccatatcaccctgcaggttactcactgaagctaagcagggctgagcctggttggtacctggatgggagaccactagtgaacactaggttgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000119680

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00069166 lncRNA downstream 213847 15896968 ~ 15900453 (-) True XLOC_034580
TCONS_00067333 lncRNA downstream 287913 15819578 ~ 15826387 (-) True XLOC_034579
TCONS_00069165 lncRNA downstream 504039 15603053 ~ 15610261 (-) False XLOC_034578
TCONS_00069164 lncRNA downstream 504039 15603053 ~ 15610261 (-) True XLOC_034578
TCONS_00067327 lncRNA downstream 861859 15214910 ~ 15252441 (-) False XLOC_034575
TCONS_00068671 lncRNA upstream 58142 16172570 ~ 16174329 (-) True XLOC_034584
TCONS_00068672 lncRNA upstream 107617 16222045 ~ 16223104 (-) True XLOC_034589
TCONS_00069167 lncRNA upstream 233072 16347500 ~ 16349089 (-) False XLOC_034591
TCONS_00069168 lncRNA upstream 1108109 17222537 ~ 17255612 (-) False XLOC_034596
TCONS_00069169 lncRNA upstream 1136774 17251202 ~ 17255611 (-) False XLOC_034596
TCONS_00067334 mRNA downstream 79976 15905691 ~ 16034324 (-) False XLOC_034581
TCONS_00067335 mRNA downstream 79976 15912255 ~ 16034324 (-) True XLOC_034581
TCONS_00067332 mRNA downstream 284049 15818778 ~ 15830251 (-) False XLOC_034579
TCONS_00067331 mRNA downstream 701112 15378254 ~ 15413188 (-) True XLOC_034577
TCONS_00067330 mRNA downstream 701281 15373412 ~ 15413019 (-) False XLOC_034577
TCONS_00067340 mRNA upstream 70948 16185376 ~ 16195144 (-) False XLOC_034586
TCONS_00067341 mRNA upstream 75029 16189457 ~ 16194952 (-) True XLOC_034586
TCONS_00067342 mRNA upstream 82475 16196903 ~ 16204885 (-) False XLOC_034587
TCONS_00067343 mRNA upstream 83969 16198397 ~ 16205471 (-) True XLOC_034587
TCONS_00067344 mRNA upstream 91181 16205609 ~ 16214891 (-) False XLOC_034588
TCONS_00067317 other downstream 1663680 14450524 ~ 14450620 (-) True XLOC_034571
TCONS_00067316 other downstream 1718943 14394515 ~ 14395357 (-) True XLOC_034570
TCONS_00067314 other downstream 1734669 14379544 ~ 14379631 (-) True XLOC_034569
TCONS_00067312 other downstream 2019389 14094794 ~ 14094911 (-) True XLOC_034567
TCONS_00067306 other downstream 2661911 13452269 ~ 13452389 (-) True XLOC_034560
TCONS_00067339 other upstream 62419 16176847 ~ 16181592 (-) True XLOC_034585
TCONS_00067347 other upstream 234311 16348739 ~ 16349432 (-) True XLOC_034591
TCONS_00067355 other upstream 727571 16841999 ~ 16842116 (-) True XLOC_034594
TCONS_00067360 other upstream 1147188 17261616 ~ 17264309 (-) True XLOC_034597
TCONS_00067372 other upstream 1300960 17415388 ~ 17416092 (-) False XLOC_034602