RNA id: TCONS_00067375


Basic Information

Item Value
RNA id TCONS_00067375
length 363
RNA type mRNA
GC content 0.33
exon number 11
gene id XLOC_034602
representative True

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 17400445 ~ 17457872 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TTCTTACATTGTTTTATGGTCATACTACTGTACTACTatacatgcactgtagGCAATGCATTtgttaaaAGTAAACCTCATGTAAAAATAATgttatatggagatacagttaaaATGACCTGCATTACgccatATGACTTTATAACCACTATTTCATGGTATAAACATTCAGCTGGCAAGAAACCACTTCTTATAGCACATTCAGCTCCCAACTCAGGAAGAGTTACATATCAAAATGCCTTTAACAACACTAATCGATTCTTTATCACAATTGCAAGTGGCTCTTATAATTTAAGTATCCTTCACTTGGAGAAAGAGGATTTTGCAACCTATTATTGTGgtAATTATCGTTTCTATTTTATA

Function

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-001106-16 Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDART00000191583

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00067366 lncRNA downstream 44069 17358084 ~ 17380310 (-) True XLOC_034601
TCONS_00069168 lncRNA downstream 168767 17222537 ~ 17255612 (-) False XLOC_034596
TCONS_00069169 lncRNA downstream 168768 17251202 ~ 17255611 (-) False XLOC_034596
TCONS_00069167 lncRNA downstream 1075290 16347500 ~ 16349089 (-) False XLOC_034591
TCONS_00068672 lncRNA downstream 1201275 16222045 ~ 16223104 (-) True XLOC_034589
TCONS_00068673 lncRNA upstream 117919 17575791 ~ 17576097 (-) True XLOC_034605
TCONS_00067389 lncRNA upstream 237354 17695226 ~ 17708630 (-) True XLOC_034612
TCONS_00067396 lncRNA upstream 352431 17810303 ~ 17813414 (-) False XLOC_034614
TCONS_00067415 lncRNA upstream 1185142 18643014 ~ 18650779 (-) True XLOC_034624
TCONS_00067420 lncRNA upstream 1250111 18707983 ~ 18712554 (-) False XLOC_034626
TCONS_00067369 mRNA downstream 8287 17400654 ~ 17416092 (-) False XLOC_034602
TCONS_00067370 mRNA downstream 8287 17412992 ~ 17416092 (-) False XLOC_034602
TCONS_00067368 mRNA downstream 11820 17400468 ~ 17412559 (-) False XLOC_034602
TCONS_00067367 mRNA downstream 19766 17400445 ~ 17404613 (-) False XLOC_034602
TCONS_00067365 mRNA downstream 87034 17332156 ~ 17337345 (-) True XLOC_034600
TCONS_00067377 mRNA upstream 8139 17466011 ~ 17499986 (-) True XLOC_034603
TCONS_00067378 mRNA upstream 108239 17566111 ~ 17570923 (-) False XLOC_034604
TCONS_00067379 mRNA upstream 108239 17566111 ~ 17571017 (-) True XLOC_034604
TCONS_00067380 mRNA upstream 116563 17574435 ~ 17582403 (-) False XLOC_034605
TCONS_00067381 mRNA upstream 130817 17588689 ~ 17591007 (-) True XLOC_034606
TCONS_00067372 other downstream 8287 17415388 ~ 17416092 (-) False XLOC_034602
TCONS_00067360 other downstream 160070 17261616 ~ 17264309 (-) True XLOC_034597
TCONS_00067355 other downstream 582263 16841999 ~ 16842116 (-) True XLOC_034594
TCONS_00067347 other downstream 1074947 16348739 ~ 16349432 (-) True XLOC_034591
TCONS_00067339 other downstream 1242787 16176847 ~ 16181592 (-) True XLOC_034585
TCONS_00067385 other upstream 183316 17641188 ~ 17645750 (-) True XLOC_034610
TCONS_00067399 other upstream 404553 17862425 ~ 17862540 (-) True XLOC_034615
TCONS_00067401 other upstream 789165 18247037 ~ 18247691 (-) True XLOC_034617
TCONS_00067412 other upstream 1105892 18563764 ~ 18569333 (-) True XLOC_034622
TCONS_00067426 other upstream 1369102 18826974 ~ 18827973 (-) True XLOC_034629

Expression Profile

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