Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00067597 |
| length | 1194 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 4 |
| gene id | XLOC_034733 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007118.7 |
| NCBI id | CM002891.2 |
| chromosome length | 74282399 |
| location | 25129520 ~ 25133853 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006915 | apoptotic process | biological_process |
| GO:0043065 | positive regulation of apoptotic process | biological_process |
| GO:0071479 | cellular response to ionizing radiation | biological_process |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0005739 | mitochondrion | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-000616-1 | Acts upstream of or within cellular response to ionizing radiation and positive regulation of apoptotic process. Located in mitochondrion. Is expressed in several structures, including brain; heart; hindbrain neural plate; midbrain hindbrain boundary neural keel; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in endometrial cancer; lung non-small cell carcinoma; and pancreatic cancer. Orthologous to human BAD (BCL2 associated agonist of cell death). |
| ensembl_id | ENSDART00000121943 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00067593 | lncRNA | downstream | 80148 | 25047617 ~ 25049374 (-) | True | XLOC_034730 |
| TCONS_00067592 | lncRNA | downstream | 80152 | 25047617 ~ 25049370 (-) | False | XLOC_034730 |
| TCONS_00069207 | lncRNA | downstream | 134800 | 24989959 ~ 24994722 (-) | True | XLOC_034729 |
| TCONS_00067587 | lncRNA | downstream | 144128 | 24984362 ~ 24985394 (-) | False | XLOC_034729 |
| TCONS_00067571 | lncRNA | downstream | 507826 | 24593262 ~ 24621696 (-) | True | XLOC_034721 |
| TCONS_00067601 | lncRNA | upstream | 205942 | 25339756 ~ 25523412 (-) | False | XLOC_034735 |
| TCONS_00067602 | lncRNA | upstream | 275342 | 25409156 ~ 25523467 (-) | False | XLOC_034735 |
| TCONS_00067603 | lncRNA | upstream | 336388 | 25470202 ~ 25523421 (-) | False | XLOC_034735 |
| TCONS_00067604 | lncRNA | upstream | 336648 | 25470462 ~ 25523390 (-) | True | XLOC_034735 |
| TCONS_00069208 | lncRNA | upstream | 854600 | 25988414 ~ 25995689 (-) | True | XLOC_034742 |
| TCONS_00067595 | mRNA | downstream | 3310 | 25120226 ~ 25126212 (-) | True | XLOC_034732 |
| TCONS_00067594 | mRNA | downstream | 17120 | 25109700 ~ 25112402 (-) | True | XLOC_034731 |
| TCONS_00067591 | mRNA | downstream | 80145 | 25047219 ~ 25049377 (-) | False | XLOC_034730 |
| TCONS_00067590 | mRNA | downstream | 133891 | 24984813 ~ 24995631 (-) | False | XLOC_034729 |
| TCONS_00067589 | mRNA | downstream | 134800 | 24984685 ~ 24994722 (-) | False | XLOC_034729 |
| TCONS_00067605 | mRNA | upstream | 424461 | 25558275 ~ 25693760 (-) | False | XLOC_034736 |
| TCONS_00067606 | mRNA | upstream | 424461 | 25558275 ~ 25697285 (-) | True | XLOC_034736 |
| TCONS_00067609 | mRNA | upstream | 744739 | 25878553 ~ 25895227 (-) | False | XLOC_034739 |
| TCONS_00067611 | mRNA | upstream | 744739 | 25878553 ~ 25895354 (-) | False | XLOC_034739 |
| TCONS_00067610 | mRNA | upstream | 744739 | 25878553 ~ 25895354 (-) | False | XLOC_034739 |
| TCONS_00067584 | other | downstream | 275624 | 24840701 ~ 24853898 (-) | True | XLOC_034727 |
| TCONS_00067552 | other | downstream | 936442 | 24187581 ~ 24193080 (-) | False | XLOC_034711 |
| TCONS_00067518 | other | downstream | 2192274 | 22937129 ~ 22937248 (-) | True | XLOC_034690 |
| TCONS_00067494 | other | downstream | 3292656 | 21836676 ~ 21836866 (-) | True | XLOC_034675 |
| TCONS_00067493 | other | downstream | 3298672 | 21830686 ~ 21830850 (-) | True | XLOC_034674 |
| TCONS_00067600 | other | upstream | 157219 | 25291033 ~ 25291152 (-) | True | XLOC_034734 |
| TCONS_00067607 | other | upstream | 629370 | 25763184 ~ 25763298 (-) | True | XLOC_034737 |
| TCONS_00067608 | other | upstream | 657415 | 25791229 ~ 25791355 (-) | True | XLOC_034738 |
| TCONS_00067631 | other | upstream | 1166981 | 26300795 ~ 26304876 (-) | False | XLOC_034753 |
| TCONS_00067641 | other | upstream | 1312206 | 26446020 ~ 26457812 (-) | False | XLOC_034760 |
