RNA id: TCONS_00067602


Basic Information

Item Value
RNA id TCONS_00067602
length 640
lncRNA type antisense
GC content 0.48
exon number 4
gene id XLOC_034735
representative False

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 25339756 ~ 25523467 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CGGCAACCTGCGAGTTTGCCTTTTTTCCTACAGTTTGTTTACCACTGACGAGGCCTTCTGCTGAGATTTGATGTAACACGAACTAGACAAACAATTGGAATCATATCACATCGTCAAAGTGTCGTGGCCCAATGTGCACTGTAGAAGAACCCTATCAGGCCTGTGACCCATTTTTGGGTCTTGACCCACCAGTTCGGAAGTACAGCTCTAAACGATCTTCTCCATTTGAGGGCTTCTCAGGCATCTGGTTCTCATGCAGaGTGAGTGGAGTGAAAAATGagaggaaagaaagagagaaatggaTTGTGACGGAGGTAGCGAGGGTAATAGGATTGAGCCTGGACTCTGCGGGGTTGAGCTGCCCTCCTAACCGGACTCACTTCCTCTTCTCTCCTCTTCCCCACTGCGAGGTCAACCAGTCGTCCATCAGATCGCTGGCTAATCCTTTCACAATGATTGAGTTGGACAAGTTTCTGAGACCAAAAGCGTAAAGAAGACGATGAATGAAAGAGAGATCACACCCAATAGATGAGATCGCTGGCCGGATGTGCATTTCTATATATGAGGGCTTGCTGATGGTAGCTCTCTGGGCTGGAGTCTGACAGATGGAGCCAGAACTTCCCTGCTCTCTTCTGGATTT

Function

GO:

id name namespace
GO:1904184 positive regulation of pyruvate dehydrogenase activity biological_process
GO:1990918 double-strand break repair involved in meiotic recombination biological_process
GO:0043229 intracellular organelle cellular_component
GO:0030504 inorganic diphosphate transmembrane transporter activity molecular_function
GO:0004741 [pyruvate dehydrogenase (lipoamide)] phosphatase activity molecular_function

KEGG: NA

Ensembl:

ensembl_id ENSDART00000173677

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00067593 lncRNA downstream 359782 25047617 ~ 25049374 (-) True XLOC_034730
TCONS_00067592 lncRNA downstream 359786 25047617 ~ 25049370 (-) False XLOC_034730
TCONS_00069207 lncRNA downstream 414434 24989959 ~ 24994722 (-) True XLOC_034729
TCONS_00067587 lncRNA downstream 423762 24984362 ~ 24985394 (-) False XLOC_034729
TCONS_00067571 lncRNA downstream 787460 24593262 ~ 24621696 (-) True XLOC_034721
TCONS_00069208 lncRNA upstream 464947 25988414 ~ 25995689 (-) True XLOC_034742
TCONS_00069209 lncRNA upstream 496598 26020065 ~ 26021046 (-) True XLOC_034743
TCONS_00069210 lncRNA upstream 616608 26140075 ~ 26156272 (-) True XLOC_034748
TCONS_00069211 lncRNA upstream 702960 26226427 ~ 26230153 (-) True XLOC_034749
TCONS_00069212 lncRNA upstream 752308 26275775 ~ 26281717 (-) True XLOC_034752
TCONS_00067596 mRNA downstream 275303 25129520 ~ 25133853 (-) False XLOC_034733
TCONS_00067597 mRNA downstream 275342 25129522 ~ 25133814 (-) False XLOC_034733
TCONS_00067598 mRNA downstream 275373 25129802 ~ 25133783 (-) False XLOC_034733
TCONS_00067599 mRNA downstream 276564 25130220 ~ 25132592 (-) True XLOC_034733
TCONS_00067595 mRNA downstream 282944 25120226 ~ 25126212 (-) True XLOC_034732
TCONS_00067605 mRNA upstream 34808 25558275 ~ 25693760 (-) False XLOC_034736
TCONS_00067606 mRNA upstream 34808 25558275 ~ 25697285 (-) True XLOC_034736
TCONS_00067609 mRNA upstream 355086 25878553 ~ 25895227 (-) False XLOC_034739
TCONS_00067611 mRNA upstream 355086 25878553 ~ 25895354 (-) False XLOC_034739
TCONS_00067610 mRNA upstream 355086 25878553 ~ 25895354 (-) False XLOC_034739
TCONS_00067600 other downstream 118004 25291033 ~ 25291152 (-) True XLOC_034734
TCONS_00067584 other downstream 555258 24840701 ~ 24853898 (-) True XLOC_034727
TCONS_00067552 other downstream 1216076 24187581 ~ 24193080 (-) False XLOC_034711
TCONS_00067518 other downstream 2471908 22937129 ~ 22937248 (-) True XLOC_034690
TCONS_00067494 other downstream 3572290 21836676 ~ 21836866 (-) True XLOC_034675
TCONS_00067607 other upstream 239717 25763184 ~ 25763298 (-) True XLOC_034737
TCONS_00067608 other upstream 267762 25791229 ~ 25791355 (-) True XLOC_034738
TCONS_00067631 other upstream 777328 26300795 ~ 26304876 (-) False XLOC_034753
TCONS_00067641 other upstream 922553 26446020 ~ 26457812 (-) False XLOC_034760
TCONS_00067650 other upstream 990355 26513822 ~ 26513960 (-) False XLOC_034763

Expression Profile

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