RNA id: TU205043


Basic Information

Item Value
RNA id TU205043
length 272
lncRNA type intronic
GC content 0.46
exon number 3
gene id G151321
representative False

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 3206499 ~ 3207465 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ggtttaggaaaagaagaacggggcagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacggttgggtttaggtaaagaagaacgggacggttgggtttaggtaaagaagaacgggacggttgggtttaggaaaagaagaacgggacagttgggtttaggaaaagaagaacgggacagttgggtttaggaaaagaagaacgggacagttgggtttaggaaaagaagaacgggacagttgggtttaggaaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU205028 lncRNA upstream 60968 3145254 ~ 3145605 (+) True G151312
TU205001 lncRNA upstream 64868 3122742 ~ 3141705 (+) True G151292
TU204997 lncRNA upstream 102028 3083898 ~ 3104545 (+) False junbb
TU204946 lncRNA upstream 191051 3005618 ~ 3015522 (+) True G151247
TU204941 lncRNA upstream 208314 2998057 ~ 2998259 (+) True G151244
TU205035 lncRNA downstream 7435 3214900 ~ 3261498 (+) False G151318
TU205061 lncRNA downstream 36145 3243610 ~ 3277604 (+) False LOC120573829
TU205034 lncRNA downstream 48484 3255949 ~ 3261498 (+) True G151318
TU205068 lncRNA downstream 114730 3322195 ~ 3322400 (+) True G151330
TU205064 lncRNA downstream 143717 3351182 ~ 3357175 (+) False ldlra
XM_039825767.1 mRNA upstream 101981 3102641 ~ 3104592 (+) True junbb
XM_039824167.1 mRNA upstream 219720 2957932 ~ 2986853 (+) True ubn2b
XM_039824166.1 mRNA upstream 253063 2947411 ~ 2953510 (+) True rpsa
XM_039824165.1 mRNA upstream 264954 2931036 ~ 2941619 (+) True LOC120574090
XM_039823688.1 mRNA downstream 56631 3264096 ~ 3276150 (+) True LOC120573829
XM_039824718.1 mRNA downstream 76143 3283608 ~ 3321386 (+) True smarca4a
XM_039824715.1 mRNA downstream 81745 3289210 ~ 3321386 (+) False smarca4a
XM_039824716.1 mRNA downstream 81745 3289210 ~ 3321386 (+) False smarca4a
XM_039824717.1 mRNA downstream 81745 3289210 ~ 3321386 (+) False smarca4a
TU205031 other upstream 58596 3146504 ~ 3147977 (+) True G151315
TU204936 other upstream 203209 3001899 ~ 3003364 (+) True G151240
TU204708 other upstream 404352 2799469 ~ 2802221 (+) True G151122
TU204669 other upstream 515011 2689720 ~ 2691562 (+) False LOC120574078
TU204682 other upstream 517535 2685103 ~ 2689038 (+) False LOC120574078
XR_005642000.1 other downstream 173822 3381287 ~ 3381386 (+) True LOC120575509
XR_005642001.1 other downstream 175049 3382514 ~ 3382613 (+) True LOC120575510
TU205238 other downstream 451532 3658997 ~ 3663282 (+) True G151471
TU205526 other downstream 1110708 4318173 ~ 4319498 (+) True G151695
XR_005641832.1 other downstream 1130629 4338094 ~ 4346405 (+) False LOC120574173

Expression Profile