RNA id: XM_039778065.1


Basic Information

Item Value
RNA id XM_039778065.1
length 522
RNA type mRNA
GC content 0.43
exon number 4
gene id gng8
representative False

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 21743197 ~ 21745734 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CTGGAAGCCTTGTAGAGGATAGGCATGAGTCACATACTCGGGGGACCCCGTTGAAGACAAGCACACCTTCATTCCAGGAGCCGGTTGCTGTTGGTCTGGCTTACTGACTTTAGTGGGAAAGTAGGATGTCAAACAACATGGCCAAGATCGCAGATGCTCGAAAGATGGTAGAACAACTGAAACTGGAAGTCAACATAGAGAGGATGATGATATCCAAAGCAGCAGCTGAGCTGATGGCCTACTGTGAAGCTCATGCCAAAGAGGACCCCCTGGTGACACCAGTACCTTCTTCTGAGAACCCGTTTCGAGAGAAAAAATTATTCTGTGTAATACTATAACCCCCACATGTACAAGACAAATGTCTACGCATTAACACTTTACATTTGCTATTTTAAGGCATGaatttcatttcagtttttttgagAAACCTGAGAAATTATCATCATTTGGACATGATAATGACGGCAATAAAAAATTTTCAAAAGTGGGTGCAAAGTTCATTTGAACAGGCCAGCACTGCTG

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0005834 heterotrimeric G-protein complex cellular_component
GO:0004871 obsolete signal transducer activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU226940 lncRNA upstream 18274 21722331 ~ 21724923 (+) True G167444
TU226937 lncRNA upstream 27804 21713943 ~ 21715393 (+) False dnajc18
TU226854 lncRNA upstream 249928 21476203 ~ 21493269 (+) True G167384
TU226840 lncRNA upstream 284333 21458121 ~ 21458864 (+) True G167376
TU226839 lncRNA upstream 286756 21455487 ~ 21456441 (+) True G167375
TU227007 lncRNA downstream 77919 21823653 ~ 21827326 (+) False sms
TU227096 lncRNA downstream 175548 21921282 ~ 21923414 (+) True G167544
XR_005636369.1 lncRNA downstream 185509 21931243 ~ 21933804 (+) False LOC120543580
XR_005636368.1 lncRNA downstream 185925 21931659 ~ 21933804 (+) True LOC120543580
TU227100 lncRNA downstream 187128 21932862 ~ 21933808 (+) False LOC120543580
XM_039777988.1 mRNA upstream 23488 21714543 ~ 21719709 (+) False dnajc18
XM_039778504.1 mRNA upstream 32820 21680133 ~ 21710377 (+) False LOC120544614
XM_039778503.1 mRNA upstream 32820 21680134 ~ 21710377 (+) True LOC120544614
XM_039778165.1 mRNA upstream 134349 21599346 ~ 21608848 (+) False LOC120544432
XM_039778164.1 mRNA upstream 154087 21565175 ~ 21589110 (+) True LOC120544431
XM_039826490.1 mRNA downstream 396 21746130 ~ 21751622 (+) False tmem45b
XM_039826491.1 mRNA downstream 1417 21747151 ~ 21751622 (+) True tmem45b
XM_039777989.1 mRNA downstream 18467 21764201 ~ 21770754 (+) True LOC120544341
XM_039776797.1 mRNA downstream 24929 21770663 ~ 21821936 (+) False LOC120543655
XM_039776798.1 mRNA downstream 24929 21770663 ~ 21821936 (+) False LOC120543655
TU226938 other upstream 22332 21715699 ~ 21720865 (+) True dnajc18
TU226936 other upstream 44816 21680193 ~ 21698381 (+) False LOC120544614
TU226872 other upstream 134450 21599083 ~ 21608747 (+) True LOC120544432
TU226694 other upstream 539131 21202665 ~ 21204066 (+) False mia
XR_005636400.1 other upstream 546160 21192054 ~ 21197037 (+) False si:dkey-71l1.1
TU226958 other downstream 19663 21765397 ~ 21770198 (+) False LOC120544341
TU227214 other downstream 395811 22141545 ~ 22144199 (+) False kif20a
XR_005636496.1 other downstream 648782 22394516 ~ 22422054 (+) False LOC120544391
XR_005636392.1 other downstream 2095803 23841537 ~ 23916038 (+) False gria3a
TU228068 other downstream 2181608 23927342 ~ 23928481 (+) True G168226

Expression Profile