Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00070356 |
| length | 2495 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 10 |
| gene id | XLOC_035891 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007119.7 |
| NCBI id | CM002892.2 |
| chromosome length | 54304671 |
| location | 40476811 ~ 40490593 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0032024 | positive regulation of insulin secretion | biological_process |
| GO:0051156 | glucose 6-phosphate metabolic process | biological_process |
| GO:0006096 | glycolytic process | biological_process |
| GO:0031018 | endocrine pancreas development | biological_process |
| GO:0042593 | glucose homeostasis | biological_process |
| GO:1990798 | pancreas regeneration | biological_process |
| GO:0050796 | regulation of insulin secretion | biological_process |
| GO:0005975 | carbohydrate metabolic process | biological_process |
| GO:0016310 | phosphorylation | biological_process |
| GO:0001678 | cellular glucose homeostasis | biological_process |
| GO:0003323 | type B pancreatic cell development | biological_process |
| GO:0005829 | cytosol | cellular_component |
| GO:0005739 | mitochondrion | cellular_component |
| GO:0016740 | transferase activity | molecular_function |
| GO:0005524 | ATP binding | molecular_function |
| GO:0005536 | glucose binding | molecular_function |
| GO:0016773 | phosphotransferase activity, alcohol group as acceptor | molecular_function |
| GO:0000166 | nucleotide binding | molecular_function |
| GO:0008865 | fructokinase activity | molecular_function |
| GO:0004340 | glucokinase activity | molecular_function |
| GO:0004396 | hexokinase activity | molecular_function |
| GO:0016301 | kinase activity | molecular_function |
| GO:0019158 | mannokinase activity | molecular_function |
| id | description |
|---|---|
| ko00010 | Glycolysis / Gluconeogenesis |
| ko00030 | Pentose phosphate pathway |
| ko00052 | Galactose metabolism |
| ko00500 | Starch and sucrose metabolism |
| ko00520 | Amino sugar and nucleotide sugar metabolism |
| ko00630 | Glyoxylate and dicarboxylate metabolism |
| ko00680 | Methane metabolism |
| ko00561 | Glycerolipid metabolism |
| ko00260 | Glycine, serine and threonine metabolism |
| ko00521 | Streptomycin biosynthesis |
| ko00524 | Neomycin, kanamycin and gentamicin biosynthesis |
| ko04010 | MAPK signaling pathway |
| ko04911 | Insulin secretion |
| ko04910 | Insulin signaling pathway |
| ko04922 | Glucagon signaling pathway |
| ko04917 | Prolactin signaling pathway |
| ko05230 | Central carbon metabolism in cancer |
| ko04930 | Type II diabetes mellitus |
| ko04950 | Maturity onset diabetes of the young |
| ko01001 | Protein kinases |
| id | description |
|---|---|
| ZDB-GENE-060825-204 | Predicted to enable fructokinase activity; glucokinase activity; and mannokinase activity. Acts upstream of or within glucose homeostasis; pancreas regeneration; and type B pancreatic cell development. Predicted to be active in cytosol and mitochondrion. Is expressed in several structures, including digestive system; female organism; heart; male organism; and muscle. Human ortholog(s) of this gene implicated in artery disease (multiple); familial hyperinsulinemic hypoglycemia 3; and glucose metabolism disease (multiple). Orthologous to human GCK (glucokinase). |
| ensembl_id | ENSDART00000129772 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00072249 | lncRNA | upstream | 632841 | 39830606 ~ 39843970 (+) | False | XLOC_035886 |
| TCONS_00072250 | lncRNA | upstream | 632841 | 39830608 ~ 39843970 (+) | True | XLOC_035886 |
| TCONS_00070342 | lncRNA | upstream | 715447 | 39760304 ~ 39761364 (+) | True | XLOC_035881 |
| TCONS_00070334 | lncRNA | upstream | 842516 | 39618689 ~ 39634295 (+) | False | XLOC_035877 |
| TCONS_00070329 | lncRNA | upstream | 1141268 | 39332416 ~ 39335543 (+) | True | XLOC_035875 |
| TCONS_00070358 | lncRNA | downstream | 12172 | 40502765 ~ 40526398 (+) | True | XLOC_035892 |
| TCONS_00072251 | lncRNA | downstream | 44403 | 40534996 ~ 40538212 (+) | True | XLOC_035893 |
| TCONS_00072252 | lncRNA | downstream | 87710 | 40578303 ~ 40590791 (+) | True | XLOC_035894 |
| TCONS_00071960 | lncRNA | downstream | 475935 | 40966528 ~ 40966788 (+) | True | XLOC_035898 |
| TCONS_00072253 | lncRNA | downstream | 963025 | 41453618 ~ 41455928 (+) | False | XLOC_035904 |
| TCONS_00070355 | mRNA | upstream | 188588 | 40284973 ~ 40288223 (+) | True | XLOC_035890 |
| TCONS_00070354 | mRNA | upstream | 191274 | 40275830 ~ 40285537 (+) | False | XLOC_035890 |
| TCONS_00070353 | mRNA | upstream | 238302 | 40210398 ~ 40238509 (+) | True | XLOC_035889 |
| TCONS_00070351 | mRNA | upstream | 313564 | 40080728 ~ 40163247 (+) | False | XLOC_035888 |
| TCONS_00070352 | mRNA | upstream | 356994 | 40081403 ~ 40119817 (+) | True | XLOC_035888 |
| TCONS_00070359 | mRNA | downstream | 82544 | 40573137 ~ 40590816 (+) | False | XLOC_035894 |
| TCONS_00070360 | mRNA | downstream | 138333 | 40628926 ~ 40633991 (+) | True | XLOC_035895 |
| TCONS_00070361 | mRNA | downstream | 154245 | 40644838 ~ 40646418 (+) | True | XLOC_035896 |
| TCONS_00070363 | mRNA | downstream | 544637 | 41035230 ~ 41173369 (+) | False | XLOC_035899 |
| TCONS_00070364 | mRNA | downstream | 546948 | 41037541 ~ 41173369 (+) | False | XLOC_035899 |
| TCONS_00070347 | other | upstream | 660646 | 39802782 ~ 39816165 (+) | True | XLOC_035884 |
| TCONS_00070348 | other | upstream | 670381 | 39806314 ~ 39806430 (+) | True | XLOC_035885 |
| TCONS_00070326 | other | upstream | 1553885 | 38922317 ~ 38922926 (+) | True | XLOC_035871 |
| TCONS_00070324 | other | upstream | 2046132 | 38430563 ~ 38430679 (+) | True | XLOC_035868 |
| TCONS_00070313 | other | upstream | 2856141 | 37620554 ~ 37620670 (+) | True | XLOC_035861 |
| TCONS_00070362 | other | downstream | 442129 | 40932722 ~ 40932838 (+) | True | XLOC_035897 |
| TCONS_00070370 | other | downstream | 844477 | 41335070 ~ 41335184 (+) | True | XLOC_035902 |
| TCONS_00070379 | other | downstream | 1219766 | 41710359 ~ 41714766 (+) | True | XLOC_035909 |
| TCONS_00070381 | other | downstream | 1496757 | 41987350 ~ 41988113 (+) | True | XLOC_035912 |
| TCONS_00070385 | other | downstream | 2141039 | 42631632 ~ 42636013 (+) | True | XLOC_035914 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000053_05704944_05710574.mRNA | True | 2074 | mRNA | 0.46 | 10 | CI01000053 | 5704848 ~ 5711121 (+) |
| bowfin (Amia calva) | AMCG00020895 | True | 2857 | mRNA | 0.50 | 10 | CM030127.1 | 36021637 ~ 36029074 (+) |
