Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00072024 |
| length | 750 |
| lncRNA type | sense_over |
| GC content | 0.53 |
| exon number | 5 |
| gene id | XLOC_036370 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007119.7 |
| NCBI id | CM002892.2 |
| chromosome length | 54304671 |
| location | 19469678 ~ 19487327 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:1904382 | mannose trimming involved in glycoprotein ERAD pathway | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0005509 | calcium ion binding | molecular_function |
| GO:0016787 | hydrolase activity | molecular_function |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | molecular_function |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds | molecular_function |
| GO:0003824 | catalytic activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00071073 | lncRNA | downstream | 257194 | 19214207 ~ 19216638 (-) | False | XLOC_036363 |
| TCONS_00072023 | lncRNA | downstream | 700823 | 18771607 ~ 18773009 (-) | False | XLOC_036359 |
| TCONS_00072022 | lncRNA | downstream | 700823 | 18771607 ~ 18773009 (-) | True | XLOC_036359 |
| TCONS_00072437 | lncRNA | downstream | 874476 | 18594067 ~ 18599356 (-) | True | XLOC_036356 |
| TCONS_00071061 | lncRNA | downstream | 941415 | 18524042 ~ 18532417 (-) | False | XLOC_036353 |
| TCONS_00072025 | lncRNA | upstream | 507852 | 19985842 ~ 19989009 (-) | False | XLOC_036374 |
| TCONS_00072026 | lncRNA | upstream | 507853 | 19985843 ~ 19988969 (-) | False | XLOC_036374 |
| TCONS_00072027 | lncRNA | upstream | 508756 | 19986746 ~ 19988352 (-) | False | XLOC_036374 |
| TCONS_00072028 | lncRNA | upstream | 508756 | 19986746 ~ 19988666 (-) | False | XLOC_036374 |
| TCONS_00072029 | lncRNA | upstream | 508756 | 19986746 ~ 19989233 (-) | False | XLOC_036374 |
| TCONS_00071088 | mRNA | downstream | 6821 | 19401086 ~ 19467011 (-) | True | XLOC_036369 |
| TCONS_00071087 | mRNA | downstream | 22345 | 19398335 ~ 19451487 (-) | False | XLOC_036369 |
| TCONS_00071086 | mRNA | downstream | 78722 | 19364568 ~ 19395110 (-) | True | XLOC_036368 |
| TCONS_00071083 | mRNA | downstream | 131721 | 19283143 ~ 19342111 (-) | False | XLOC_036367 |
| TCONS_00071082 | mRNA | downstream | 160322 | 19283143 ~ 19313510 (-) | False | XLOC_036367 |
| TCONS_00071090 | mRNA | upstream | 164209 | 19642199 ~ 19649617 (-) | True | XLOC_036371 |
| TCONS_00071091 | mRNA | upstream | 323875 | 19801865 ~ 19904124 (-) | True | XLOC_036372 |
| TCONS_00071092 | mRNA | upstream | 470616 | 19948606 ~ 19975087 (-) | False | XLOC_036373 |
| TCONS_00071093 | mRNA | upstream | 470616 | 19948606 ~ 19977088 (-) | True | XLOC_036373 |
| TCONS_00071094 | mRNA | upstream | 594997 | 20072987 ~ 20138251 (-) | False | XLOC_036375 |
| TCONS_00071084 | other | downstream | 160417 | 19296162 ~ 19313415 (-) | False | XLOC_036367 |
| TCONS_00071076 | other | downstream | 257175 | 19214829 ~ 19216657 (-) | True | XLOC_036363 |
| TCONS_00071074 | other | downstream | 258148 | 19214725 ~ 19215684 (-) | False | XLOC_036363 |
| TCONS_00071065 | other | downstream | 889025 | 18584693 ~ 18584807 (-) | True | XLOC_036355 |
| TCONS_00071060 | other | downstream | 935966 | 18523081 ~ 18537866 (-) | False | XLOC_036353 |
| TCONS_00071104 | other | upstream | 936856 | 20414846 ~ 20414961 (-) | True | XLOC_036381 |
| TCONS_00071106 | other | upstream | 1354594 | 20832584 ~ 20838022 (-) | False | XLOC_036383 |
| TCONS_00071108 | other | upstream | 1364144 | 20842134 ~ 20844502 (-) | True | XLOC_036384 |
| TCONS_00071115 | other | upstream | 1462469 | 20940459 ~ 20943772 (-) | True | XLOC_036389 |
| TCONS_00071158 | other | upstream | 2806304 | 22284294 ~ 22287211 (-) | False | XLOC_036407 |
