RNA id: TCONS_00007106


Basic Information

Item Value
RNA id TCONS_00007106
length 9507
RNA type mRNA
GC content 0.46
exon number 18
gene id XLOC_003655
representative False

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 39576541 ~ 39926872 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GCCGCAGAATGGCTCTATGATCCTCTACAACAGGAAGAAGGTGAAGTACAGAAAAGATGGCTACTGCTGGAAGAAGAGGAAAGATGGCAAAACCACACGGGAGGATCACATGAAGCTCAAAGTGCAGGGAGTCGAGTGTCTGTACGGCTGCTATGTCCACTCCTCCATCATCCCCACATTTCACCGCCGCTGCTACTGGCTGCTTCAGaaTCCTGACATTGTGCTGGTCCACTACCTGAACGTGCCCGCCATAGAGGATTGTGGAAAGCCGTGTGGGCCCATCCTCTGCTCCATCAACACTGATAAGAAAGAATGGGCCAAATGGACCAAGGAGGAGCTCATCGGACAGCTCAAACCCATGTGTGCTGGAAGCAGCCTGCATCACAAATGCAACAGTGCCAAACACCGTATCATCTCCCCAAAAGTGGACCCACGTGCCGGAGGCGCCTACAGCAGCACCCACTCCGAAGTCCAAAACAACGATGTGTCAGAAGGAAAGACGGAGCACAGCCACAGCGGCGGAAAGAACGGCCGAGCAGGAGGAGATGGAGCCGCTGGAGCAGGAGGCAGAGAGAAAAGAAACGGCAAAGTGCACAAACCAGCCCTACTCCACCAGAACAGCATGGAGGTGTCCTCGACCAATCAGGTGGAAGTGCCGGACACCACCCAGAGCTCACCCGTCTCCATCAGCAGCGGTTTAAACTCTGACCCGGATATGGCAGACAGTCCTGTGGTGACCGGAATGGGCCATGTAGCTTCAGTAATGAGTAGTCTATCTCAATCCGCAACTGTATTCATGTCCGAGGTCTCTGGAGATCCTGTCTATAGCATGTCGCCCACTGTAGACCCCAACGCTCACCTATTGGGTCCCGACCCAGCCTCCAGCAGCCTGGTGTTAGCAGTGACAGCCGAAAGCCACAAGTTTGCCTTTGCTAATGCGGTAGGGTTAGCGGATCCAGCGTCCGCTGATGGACTGGGTATGTTGACAACAGCCGGTGTGTCCGAAGAACTGGTGCTGTCTAGTAACCTGGAAACAGGAAGTATTAAGTTACCCGAAACCAATATGAACTTTGACCCCGACTGCTTTCTCAATAACCCCAAACAAGGTCAAACCTACGGAGGAAACGGGATGAAGACGGAGGAGAGCAACGGGAGCAGCTGCAGTAACGGGATGCGGTGTTCTCCACCACTCGGAGATAACGGTTACAGCTTCAACGCAGCCCTGGTCAAAAACATCAAGACGGAGGACACGTCATTCGAACAGCAGCTGGCTAAAGAGAGCGGCTATCAGGTTGGAGATGCAATCGGTGCAATCTCCGCTTCCTCAAGCACCAATTCCGGTCAAAACTCGCTAGCTTTGACTCCCACCGGATCTCTGCTGCCGTCTGGAGGTGGACTCAGTCCCAGCACCACACTGGAGCAGATGGATTTCAGTGCAATTGACGCCAAGCAAGACTATCCAGCTAGTGTTATAGCAGCAGCGAGCTACAGCCAAACCCATCTGGCCCACCAGAGTCACTCCCCCAGCTTCTTCCTGCAAGGTTCTCCTCAATCCCAGAACCACCAGAACAACTCCGTCTCCACCCAGAACTCTCACGACTCCAATGCCTACATGGGATTGTCAGTAGTCAAAACGGACTCGTCGGGAACCAACGGGGATTTCCACCACCATCACCATACCCTCACAAACCAGCACACTGCCTCCAACTGCAACGGTGGATCTCCAACTGAACGCAACAACGGACAGGCAGGTTCACTTCAGATTCTGCAGTACCAAAACCGCTTTGCGAGTACAGGTCAGGAGCATGAGGAGATGAGCGGTTTGGAGCAGTCGACGGGAGCAGAACAAGAAGGAGGAGGCATTCAGGAGAAAGATTCGGATGGTAGGATGAAGCAAGGCGATCACTTGCAGACTGGTGAAGCTGAGGGTGTAGGAGGCGCTGAGCACTACCTCCAGCAGCCGACGGAGACTGGGGGAGTAGGATCTGGAGGAACGAGCGCAAGGGAAACTGGAAACCTGTGCAATGACACCGATAATAACACCTCTAATAGTTCCCATCAACAGCTCCTGCAGGGAGCCGGGTTGGTACCTGGACTTTTTAGCGCCGTAGGCGCACATCAAACCCTGACCAGCACTGGCACCAACGGAGGAGGCTCTATGGAGATCAACTTAGACCATTTTGATGTTTCATTCGGGAATCAGTTCTCAGACCTCATCAATGACTTCATTTCAGTGGAGGGGGGAAGTGGTACAGGGGTAGTCCCAGGTAGCAATGCTCTCTACAGCCATCAGCTGATCACCCATTCGGGAACAGAGGGGCAGGTCTCCTCTGGTACTGCAGCTCAGCAGGGTGGAGATGAAGGAGCTCATGGGGCGAGAGGGTATAATTCGGCAGAGCTTTGCCTACAGCCCTGCTGCAGCCCGCAGTCCTCACAGTCCGGAGCGGTGGCGGCCGAGGCGGGACAGCTGGCATACATGCAGGTTGCTGAGGCAGTGTCGGCTGCTGTGGCTCATGGGAACATGGGAATGTTACAGGCCACCGGGAGGCTATTTGTGGTGACGGACTATTCTCCAGAGTGGTCTTATCCTGAGGGTGGAGTGAAGGTGCTGATCACTGGTCCATGGCAGGAGGCCAGCAGTGAATATACCTGCCTGTTTGACCAGATAACAGTTCCAGCCTCCCTCATCCAGCCCGGGGTGCTACGCTGTTACTGCCCAGctcatgACACAGGATTGGTGACCCTGCAGGTGGCAGCCAGCAGTCAGATCATCTCCAACTCAGTGGTGTTTGAGTATAAAGCCCGTGCCCTGCCTGCCCTGCCCTCCTCCCAGCACGACTGGCTCTCTTTGGATGATAACCAGTTCAGAATGTCCATCCTGGAACGCCTAGAGCAGATGGAGCGAAGGATGGCAGAGATGGCCGGTCAGCAGCAGCAACAAGGTGGAGGAGGAACATCCGAAAGTGGTGGAACCACAACCGGAGAAGGAGGAAGAAGCAACTCTGAACAGGCACAGTTCTCACCAATTCAGGGTCAGAGCCAGGGACAAGCTCCGGCTGGGAGCTCATTCGAAAGCCGTGTGGTGGTCGTTTGTGAAAAGATGATGAACCGAGCCTGCTGGGCCAAATCCAAACACCTGATCCACTCCAAGACGTTCCGGGGCATGACTCTTCTTCATCTGGCAGCTGCCCAGGGCTACACCACGCTTATCCAAACACTTATCAAGTGGCGCACCAAGCATGCAGACAGCATTGACCTGGAACTTGAAGTTGACCCTCTAAATGTGGATCATTTCTCTTGCACACCACTGATGTGGGCTTGTGCTTTGGGTCATATGGAGGCTGCAGTGGTTCTCTATAAGTGGGATCGGCGGGCTTTGGCTATCCCAGATTCTTTGGGTCGCTTACCACTGGCTATCGCTCGCTCCCGTGGCCACACCAAGCTGGCAGAGTGTCTGGAAAGCCTTCAAAGGGAGGAGCAGCAGTCAGGAGCACtgactacaactcccagcatgcctTTCTCACCGTCTACCGAGGCCTCAGCTGCAGAGGGATGGATGAATGTTTGGGGTGCAGAGGCTACTTCTGTAGGACTGAAAGAAAGCAACATCGCTAGTTCTGCTTCCAGCTCAAGCTCAGATTTAAGGAGACCCAGGTCGGAGCCATCCAGTTTCTATAGCAGCGTTAATCACGGGGACGCTCCGTTAAGCAAGAAACACAAACCCAACCCCGAAACCCTGCAAACTCGTCCCAGcaaatcctgctctgccccccttGGACTAGAAGAACATTCCCACAAGCCTAAAACATGCCCTTCCAAGCCGAGGGATTCTGCTGTGGAGAAAGAGCAAGGAGATGGTGAACAGTCTCAGAATAAAGTGGGCTCAACCTGTGGAGGTGGGCGCTGGGGTTCCAGACAGGCTGCAGGACGGAGAGTATCAACTACAGGACTTGGCAAGGAAAGACTCGCGAATAGACTGAGATTAAGAGAAATTGCTAGTGCGGGAACAATCTCTGATCTGAGGACAAGCCAGGAGGATCTGGAGAACACAGGAGACCTGCAGAATATGAACATGATGACTTTGGCTGAGGAAGTTATCGAGGCGACATCCGATCGCATCAAGAGGGAAAACTTTGTTGCGTCAGACACTTCTCTAGACGGTGTTGGAGTCAGCAGTACCATGAGTTGGTTGGCCAGTTACCTTGGAGATGCAGAGAGGTTCCTGTTTAACAAGCCTCTAACTTCCTCTCCTGGCCTGGGAACGGTCCACGGTGGAGCACAGCCAGAACTTGACGGCCCTCTTGGGAAACTTGGCATTCAGTCCCCTGCTGAATGGACTGCGCTCCTTAATGCCTCCCACAACAAGGAGGAGCGTGACTTGACCCAGCTGGCCCTGTCGGATCCTGAACAGAGGGAACTTTATGAGGCAGCTCGCCAGGTCCAGAACACTTTCCGCAAGTACAAGGGTCGGCCACTTCGGGAGCAGCAGGAACTGGCAGCTGCTGTCATTCAGCGCTGTTATAAGAGGTACAAACAGCTGACATGGATAGCCTTGAAGTATGCACTTTATAAGAAGATGACGCTGGCCGCCATCCTTATCCAGAGTAAATTCCGCAGCTACCACGAACAGAAGAAGTTCCAGCAAAGTCGCAAGGCAGCCGTGCTGATCCAGCAATATTACCGCAGCTACAAAGAGCTTGGCCGACCGAACCCACGCAGCCGAGCCACTGCAGCTGCACTGGTGCAGCACAAACTCAGAAGCAGTTTACTGACCAAGCGACAAGACCAGGCTGCCAGAAAAATCATGCGCTTTCTGCTGCGGTGCCGTCACAGGGCGAAAGAATTGAAAAAGGCCAAGGAACATGAGAACGCCGCAAAGAGCCCCGTCGCAATGTAACATCTCCGAGCAGACCCTTTCTCTTCCACTTCAACTGCGTTTTTACAAGAGACGAACACTttagaggaggaaaaaaaagcaaaaattctTCAAGAAGCGGAGCGTGTCATCGGACGTGCGGCGGTTGAACTCTAGCAGCGTTGTGACTGATTCTGCATTGTGTATTTTCTCGCTACGGGGGAACTGAAATCAAGACTATTGGGGAAATATGACATTATCTTCATGGCATTTTTGCACtcttcatagattttttttctttagattataagaaaaaaaaggaaaaaaaaaacgaacgaAGACCAAGGAGCAGAGGCTTTTTATTCTGACGACGCTTGTAAAATATCACGCGACATGAACAGATGGAAATCAGAAAAACGTCATGCTGGAAGCCGCTTcagattacatttttatattttgaaaggAAAAACACAGCAATCAgtttggaacaaaaaaaaaaaaagaacaaaacctaatgtaaaatgtaaaccaAAAAAAGGCCTCATTTCAGTGACCATATGCATGCCGAGTATTTGAAATCAGTCTCTCATTCTCCACAAATCTTTGTTTTTGACAAATGCTGTCGGTTCATTCAAAGGGAAGCCTTCATATGAATGTAGATGGGGTCAgggcaaaaaaaaatgctgggtttgaAATATCAGTGTCTTACCTTTGTCTTTACGGGGGTTATAGGGGACTTCTGACGACATCTTGTGGGATTGAAGCAAAGCCCTCTGGGTTACCTGTTTCGTGTGCACTGTTTTCGACTTTCTTATGGGTCCTTTTCTTAATGTCATTTTTGCTGGCCTGACTTTGTGTGTCCCGTGTTTGTTGAATTGAATCTGGAtacagtgcatgtgtttgagCGAAACGCTCCTGCATGCTGAcgtaaatgttttgtgttttattttcactcattcattcatattgGTGATATTGTGGCACCATCAAACTAGCCTAGTCCTATGTTGCCTGTTTGTTTTCTGAGAATATTATTATAAAGACTATTATTTTTGTATagttctgttatttattttagtagtATTACTGGGTTTTGCTTAAgcgttttattttaattgtgcGAAGGATCGATGATCCTTTTTGTTTTGAAAACTGACTTTTTTTATGTGAATTGTGCCACAGCGCCAAACGTATATTTGCAAAGGTTATCTTCCATTaatgtgtgcgcgtgcgtgtgtgtgtgcgtgttgtgaTACGTTTCTTCATTGTTACTGTTCGTGATTTCCAACAGCTCCAGAAAGCCACCACAGGCTTTCCCAAGGAGATTCACTGAACATTGCCTTGACTTCTTGACTTTTTGAAGGGTCCCTATACAGAAgcttcaacaaaaaaaaacaacaaaaaaatccatatttttgACTATTGAGTGGTCCCTGTATATATATCGAAGATGGGTGAAGGAGCATTGATAGCCAGAAACTTTTTCCGAAGAGGATTGTATTTAAgaatatatagtattttattcataaattggATTATAACACATTAAGAGacgaacaaaaaaatatattgtatagtTTTCTTTGAGCGCCCAAGATGTACGGTTGTATTGtttgtaaatactgtaaatatcgGTTGCGAAGAAGGAGCCATGTGCATGAAACTTTAAGACATTGAACATAATGTAAAGATAAAAATGTAGTGGCAACGGTCTGTAATACGAGTCGAACAACTTTACTATAAGACTTTGTTGGAAATGTTCTTACGCAGAGCGTTCTCTAAAGCATGACATGAATCACGATAAAACCGTAGATTTAGCAGAAGAGCCAAACAAATCCGTCAGACACaactggattattattatttttcagggTTAGAGAGAATTATTTTCTTTAGTTCTTCTTCTACAAATGGTGACCAGTCATATGAATACTACTATAAGCTACTCCTTTTGAGAACGACGAGTCTATTGAACGACAAACATCACTCATACACCCAACAGAGGATGAAATGTGTCCAcaggttttttttgttgttgtcttgttTAACATGACTAGGAATATTCTCACATTTAATCGTCTCCTCAGTATTAAACAATGGAGGTTAAAAGTAGGTCATGTCATATTAAACATGATGTTGACGTGAGGGTTGTGATTGGTTATTTCAAGCAGGCGATTCCCATACACATGCTAGAAAATATCACATTCAAAGAGGTTCAAGCATATCGTATCGCTTAAAACATACATTTCTACGACTGCCATGCGCTCATATTATTCTTATTCAtagctttattttcatttctcGGGGGGCTGCTACCGACATTCAAAACCCCATTGTTGAGTCACGCACATTCATATTGATTTGTCCTCTTTTTGTTGCTCTTTTCACAGCACATTCGTGAATATCTTTCACAATTTCCCAGAAAGAAATTCGAGACTAACCTTCCCCCTAAATTTCCAAAGTGATTTCAGCTGACAGGAGGCATCATTTAAACTTACACCAGCACATTTTGCCTAttaagatatattaaataaaaggACATGGAAAGAATGTGGTGCTGAATAATTATATAGTTTTACTATCTATTCCCCACTCAGAGACTCAGTGTTATTATAGAAAGTGCCTAAAATATTCAACCAATATCAGGAGTGTTTGATTCCTAAAGTCGACTGCTCTTTTTTTGATGGTATACAGCACTAAAATAAACGGAGCCCAGGTTTGTTTTCTCCCCTTAAACTTGAACATGAAGCACCTGCCATATTGGTTTTGTCGCCTATTCATTGACTTCACTTCATGTCTCCAGTTATGACTAATGTTTTTGCACATTATGCATGCATGCTTTCATTATTTCTTTCGTTTTGTGTTCTTTCCCATGTCATATCTAAACTGGGCCAGGAAAGTAGGACATGAAAGTTGGCacattatataataatttcaTCCGGAAAACCATTGCTAGATTCAAGTCAGAGCACAACTCCTCATAAAGGTGTCCACCTTCTCCATCCCAATGCTATTCTTCTGTCGTTAAACTTCAGGAAATCATCCGAACTCGCCAGGAAAACTGTTTATGGATCTCCAGGTATATGTATCTCAGTAACTTTCTGTTTGGGTCATTCGTACGGGAACAGAAGAACAAATCTGCCTCCCTTATGTAGTTTTTTACTCAGGGTGCTAAAACAGGGAGAGGGTGTTTCACACGGAGACTAGAGTAGGTTAGGTTCAAAGTCTCCGGGTTCAGCTCAGAATCAACAGGAGAAACCACTGGGGGTGTGTATACTTCCATTCGCTTCTTTACAAACCACAGCTTTCGGAGACATGACTGTGACTCGGGTTACAGGATATTATAGGCTAGACCGCGTGTGTTTATAGAGTTTTTACGACCATTATTTCCAAATCTGAGCAGGTATCATCGTTCGTGCAGGTATCATCGCTCATTTAGTAGTATTACCACATCCCCGTGGGATTGGGAATGCATGATAAGTATACCTCAGCGCCAAATACCTTCAGAAAAGGCGGGAGATCCAGTCCTCTTATGAAACAGCTCAGTATGCGTGCATCTTTTACGTCGACCGGATCATGCTTTCCGTATTTTTGTGTCAGAGAAGAGAAATAATATGCACTTTGTACAGCTCACCATCCCAGTTGAATTTCCTCTCCGAGTCCTGGTGTGTTTTGCGCGCGCACGTGcgcgtgcgtatgtgtgtgtgtataaatgtgctaTATCTCGACGTATGAACACCGATGAGCACGCGTGGAGGTTTTAGCCGAATGAGAGGAAAACACTAGTATTGGTGCAGTTGGAAGTTTGTACGATGTCCTACAAAATCCTCTGTTTGGAACTCCGGAAATGCAGGTTTTAGGCTTAAACTGAACCGCAAAAACCACCCGATTATAAGCTTTTCACTTACAAGTACAGAGCAATAAACACTTTGTTTTTAGCTGAGCTCTTTAGGTTGAAAGAATACGGATATgtcaaacataaaatataaagaaaaatagaaaaaaacagacattggGACATGCTTAGTTCACTTCCTCTTATGCAATTACAGGTACACAGAGAGAGGTGTTCAGTGGTCTGTGGACATTGATTTCATATTTCCCAGCCCTAATGCAcgttttcatcattttaaaatgaagatagtaaaaaaaaaagataaaatatgagCCCATATTTCTTACAGGGCAGTGGGCTTTCAACACTCTGCATGTGAAGCTAGTATTAGACCTCTGTttttcctccctctctctctcgctctccctctctctctctctctctctctctctctctctctcttgctctctcctTCTCCTTCATTCCTGCTTTGTGCTCCTCGTactctcctctcctcctctgatGAGTTTTGCCTCATGTTGTTTTCTCGGCCGTCTCCCTCTTTCTGTCCTTCTTGTGAGTTTTTGGTTTGTTTCCTTTGGTTtctttttgttgcagttttgtaACTGTGCATGTGAGAGCATCACTGAATTGTTggatatgttttaaaaaaaaataaaataaatattcagctGCTGAAGCCATGCAAAACATTTTGAATTGCCcttaaaatatggaaaatgttTTCTGAATGCTTTATATAATTTCTGCTGTAAAATAAAACCTTAAAAGAGAAATGTTGCTCACGCTGtctttt

Function

GO:

id name namespace
GO:0006887 exocytosis biological_process
GO:0099643 signal release from synapse biological_process
GO:0019228 neuronal action potential biological_process
GO:0043269 regulation of ion transport biological_process
GO:0050877 nervous system process biological_process
GO:0043010 camera-type eye development biological_process
GO:0007267 cell-cell signaling biological_process
GO:0007268 chemical synaptic transmission biological_process
GO:0007269 neurotransmitter secretion biological_process
GO:0001505 regulation of neurotransmitter levels biological_process
GO:0050953 sensory perception of light stimulus biological_process
GO:0099177 regulation of trans-synaptic signaling biological_process
GO:0098916 anterograde trans-synaptic signaling biological_process
GO:0002088 lens development in camera-type eye biological_process
GO:0007600 sensory perception biological_process
GO:0007601 visual perception biological_process
GO:0017156 calcium-ion regulated exocytosis biological_process
GO:0017157 regulation of exocytosis biological_process
GO:0048880 sensory system development biological_process
GO:0007626 locomotory behavior biological_process
GO:0099536 synaptic signaling biological_process
GO:0099537 trans-synaptic signaling biological_process
GO:0086010 membrane depolarization during action potential biological_process
GO:0051049 regulation of transport biological_process
GO:0003008 system process biological_process
GO:0051899 membrane depolarization biological_process
GO:0006812 cation transport biological_process
GO:0050803 regulation of synapse structure or activity biological_process
GO:0050804 modulation of chemical synaptic transmission biological_process
GO:0001654 eye development biological_process
GO:0006836 neurotransmitter transport biological_process
GO:0007423 sensory organ development biological_process
GO:0045055 regulated exocytosis biological_process
GO:0150063 visual system development biological_process
GO:1990351 transporter complex cellular_component
GO:0034702 ion channel complex cellular_component
GO:0034703 cation channel complex cellular_component
GO:0034706 sodium channel complex cellular_component
GO:0042995 cell projection cellular_component
GO:0043005 neuron projection cellular_component
GO:0030424 axon cellular_component
GO:0120025 plasma membrane bounded cell projection cellular_component
GO:0001518 voltage-gated sodium channel complex cellular_component
GO:0045202 synapse cellular_component
GO:0099503 secretory vesicle cellular_component
GO:0097458 obsolete neuron part cellular_component
GO:0070382 exocytic vesicle cellular_component
GO:1902495 transmembrane transporter complex cellular_component
GO:0005509 calcium ion binding molecular_function
GO:0000149 SNARE binding molecular_function
GO:0005198 structural molecule activity molecular_function
GO:0005212 structural constituent of eye lens molecular_function
GO:0005248 voltage-gated sodium channel activity molecular_function
GO:0005272 sodium channel activity molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

ZFIN:

id description
ZDB-GENE-080229-1 Predicted to enable double-stranded DNA binding activity and transcription coregulator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Human ortholog(s) of this gene implicated in nonprogressive cerebellar ataxia with mental retardation. Orthologous to human CAMTA1 (calmodulin binding transcription activator 1).

Ensembl:

ensembl_id ENSDART00000157659

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00008418 lncRNA upstream 193607 39373712 ~ 39479267 (+) False XLOC_003654
TCONS_00008671 lncRNA upstream 295787 39373720 ~ 39377087 (+) True XLOC_003654
TCONS_00008417 lncRNA upstream 382240 39287369 ~ 39290634 (+) True XLOC_003653
TCONS_00008416 lncRNA upstream 388898 39262536 ~ 39283976 (+) True XLOC_003652
TCONS_00008668 lncRNA upstream 391983 39187531 ~ 39280891 (+) False XLOC_003651
TCONS_00007112 lncRNA downstream 42432 39969304 ~ 39977128 (+) False XLOC_003657
TCONS_00007113 lncRNA downstream 67125 39993997 ~ 39998798 (+) True XLOC_003657
TCONS_00008673 lncRNA downstream 184609 40111481 ~ 40116646 (+) True XLOC_003659
TCONS_00008674 lncRNA downstream 293183 40220055 ~ 40434080 (+) True XLOC_003662
TCONS_00007123 lncRNA downstream 670691 40597563 ~ 40603087 (+) True XLOC_003664
TCONS_00007101 mRNA upstream 524675 39120306 ~ 39148199 (+) False XLOC_003649
TCONS_00007103 mRNA upstream 524676 39135050 ~ 39148198 (+) False XLOC_003649
TCONS_00007102 mRNA upstream 530793 39120332 ~ 39142081 (+) False XLOC_003649
TCONS_00007104 mRNA upstream 531419 39135086 ~ 39141455 (+) True XLOC_003649
TCONS_00007099 mRNA upstream 560619 39105019 ~ 39112255 (+) False XLOC_003648
TCONS_00007107 mRNA downstream 1956 39928828 ~ 39954612 (+) False XLOC_003656
TCONS_00007108 mRNA downstream 2012 39928884 ~ 39953618 (+) False XLOC_003656
TCONS_00007109 mRNA downstream 8282 39935154 ~ 39956925 (+) True XLOC_003656
TCONS_00007110 mRNA downstream 32167 39959039 ~ 40021080 (+) False XLOC_003657
TCONS_00007111 mRNA downstream 42176 39969048 ~ 40014177 (+) False XLOC_003657
TCONS_00007097 other upstream 869136 38803611 ~ 38803738 (+) True XLOC_003642
TCONS_00007094 other upstream 1084308 38588451 ~ 38588566 (+) True XLOC_003640
TCONS_00007079 other upstream 2021910 37638982 ~ 37650964 (+) False XLOC_003630
TCONS_00007127 other downstream 722599 40649471 ~ 40655871 (+) False XLOC_003667
TCONS_00007131 other downstream 962308 40889180 ~ 40889294 (+) True XLOC_003670
TCONS_00007137 other downstream 1183797 41110669 ~ 41157928 (+) False XLOC_003675
TCONS_00007139 other downstream 1208737 41135609 ~ 41157926 (+) True XLOC_003675
TCONS_00007149 other downstream 1538235 41465107 ~ 41465236 (+) True XLOC_003680

Expression Profile

//

Homologous

species RNA id representative length rna type GC content exon number chromosome id location
grasscarp (Ctenopharyngodon idella) CI01000306_11052174_11076357.mRNA True 5933 mRNA 0.54 23 CI01000306 11052174 ~ 11076496 (+)