Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039796696.1 |
| length | 1210 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 8 |
| gene id | rplp0 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053115.1 |
| NCBI id | CM020912.1 |
| chromosome length | 44863486 |
| location | 11149713 ~ 11152286 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0006414 | translational elongation | biological_process |
| GO:0042254 | ribosome biogenesis | biological_process |
| GO:0005840 | ribosome | cellular_component |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02941 | RP-LP0, RPLP0; large subunit ribosomal protein LP0 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU50183 | lncRNA | upstream | 136804 | 10997230 ~ 11012909 (+) | False | G37397 |
| TU50185 | lncRNA | upstream | 150880 | 10997230 ~ 10998833 (+) | True | G37397 |
| TU50154 | lncRNA | upstream | 206087 | 10936683 ~ 10943626 (+) | True | G37383 |
| XR_005638986.1 | lncRNA | upstream | 220326 | 10928504 ~ 10929387 (+) | False | LOC120557560 |
| TU50148 | lncRNA | upstream | 220329 | 10928477 ~ 10929384 (+) | True | LOC120557560 |
| TU50343 | lncRNA | downstream | 192454 | 11344740 ~ 11345059 (+) | True | G37521 |
| TU50344 | lncRNA | downstream | 194800 | 11347086 ~ 11347671 (+) | True | G37522 |
| TU50345 | lncRNA | downstream | 196850 | 11349136 ~ 11349368 (+) | True | G37523 |
| TU50346 | lncRNA | downstream | 197264 | 11349550 ~ 11349773 (+) | True | G37524 |
| TU50348 | lncRNA | downstream | 201990 | 11354276 ~ 11354743 (+) | True | G37526 |
| XM_039796692.1 | mRNA | upstream | 2271 | 11115242 ~ 11147442 (+) | True | LOC120556879 |
| XM_039796695.1 | mRNA | upstream | 2271 | 11115257 ~ 11147442 (+) | False | LOC120556879 |
| XM_039796693.1 | mRNA | upstream | 2271 | 11115664 ~ 11147442 (+) | False | LOC120556879 |
| XM_039796694.1 | mRNA | upstream | 2271 | 11133270 ~ 11147442 (+) | False | LOC120556879 |
| XM_039796504.1 | mRNA | upstream | 46052 | 11100133 ~ 11103661 (+) | True | myl2a |
| XM_039796698.1 | mRNA | downstream | 1264 | 11153550 ~ 11156414 (+) | True | LOC120556881 |
| XM_039797722.1 | mRNA | downstream | 4422 | 11156708 ~ 11167806 (+) | True | r3hcc1 |
| XM_039797723.1 | mRNA | downstream | 4422 | 11156708 ~ 11167806 (+) | False | r3hcc1 |
| XM_039797528.1 | mRNA | downstream | 67103 | 11219389 ~ 11226582 (+) | True | aggf1 |
| XM_039797530.1 | mRNA | downstream | 67124 | 11219410 ~ 11226582 (+) | False | aggf1 |
| TU50184 | other | upstream | 151576 | 10997230 ~ 10998137 (+) | False | G37397 |
| TU49895 | other | upstream | 839717 | 10305187 ~ 10309996 (+) | True | G37197 |
| unassigned_transcript_198 | other | upstream | 2326982 | 8822660 ~ 8822731 (+) | True | trnae-cuc_13 |
| unassigned_transcript_197 | other | upstream | 2327405 | 8822237 ~ 8822308 (+) | True | trnae-cuc_12 |
| unassigned_transcript_195 | other | upstream | 2333316 | 8816325 ~ 8816397 (+) | True | trnar-acg_14 |
| TU50347 | other | downstream | 199792 | 11352078 ~ 11352387 (+) | True | G37525 |
| TU50377 | other | downstream | 238453 | 11390739 ~ 11394334 (+) | False | LOC120557336 |
| TU50430 | other | downstream | 627892 | 11780178 ~ 11805394 (+) | True | G37597 |
| TU50615 | other | downstream | 1100780 | 12253066 ~ 12254974 (+) | True | G37714 |
| XR_005639029.1 | other | downstream | 1122474 | 12274760 ~ 12278624 (+) | True | LOC120557851 |
