Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00073972 |
| length | 854 |
| lncRNA type | retained_intron |
| GC content | 0.40 |
| exon number | 3 |
| gene id | XLOC_037670 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007120.7 |
| NCBI id | CM002893.2 |
| chromosome length | 56459846 |
| location | 11554089 ~ 11560432 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0002088 | lens development in camera-type eye | biological_process |
| GO:0007601 | visual perception | biological_process |
| GO:0005575 | cellular_component | cellular_component |
| GO:0005212 | structural constituent of eye lens | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-040718-324 | Predicted to be a structural constituent of eye lens. Predicted to be involved in lens development in camera-type eye and visual perception. Is expressed in lens and solid lens vesicle. Human ortholog(s) of this gene implicated in cataract 42. Orthologous to human CRYBA2 (crystallin beta A2). |
| ensembl_id | ENSDART00000146832 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00074962 | lncRNA | downstream | 1186581 | 10368380 ~ 10370625 (-) | True | XLOC_037663 |
| TCONS_00073926 | lncRNA | downstream | 2186340 | 9355372 ~ 9370866 (-) | True | XLOC_037651 |
| TCONS_00073922 | lncRNA | downstream | 2268136 | 9286419 ~ 9289070 (-) | True | XLOC_037649 |
| TCONS_00073923 | lncRNA | downstream | 2268146 | 9286419 ~ 9289060 (-) | False | XLOC_037649 |
| TCONS_00073924 | lncRNA | downstream | 2268167 | 9286419 ~ 9289039 (-) | False | XLOC_037649 |
| TCONS_00075298 | lncRNA | upstream | 10973 | 11571312 ~ 11572249 (-) | False | XLOC_037671 |
| TCONS_00075299 | lncRNA | upstream | 10973 | 11571312 ~ 11572354 (-) | False | XLOC_037671 |
| TCONS_00075300 | lncRNA | upstream | 35648 | 11595987 ~ 11598944 (-) | False | XLOC_037673 |
| TCONS_00073976 | lncRNA | upstream | 84890 | 11645229 ~ 11655031 (-) | True | XLOC_037673 |
| TCONS_00075301 | lncRNA | upstream | 262040 | 11822379 ~ 11855293 (-) | False | XLOC_037675 |
| TCONS_00073964 | mRNA | downstream | 5598 | 11548233 ~ 11551608 (-) | False | XLOC_037669 |
| TCONS_00073963 | mRNA | downstream | 6495 | 11548233 ~ 11550711 (-) | False | XLOC_037669 |
| TCONS_00073966 | mRNA | downstream | 7827 | 11548889 ~ 11549379 (-) | False | XLOC_037669 |
| TCONS_00073962 | mRNA | downstream | 293978 | 11245962 ~ 11263228 (-) | True | XLOC_037668 |
| TCONS_00073958 | mRNA | downstream | 751975 | 10781687 ~ 10805231 (-) | False | XLOC_037666 |
| TCONS_00073974 | mRNA | upstream | 16163 | 11576502 ~ 11587070 (-) | True | XLOC_037672 |
| TCONS_00073975 | mRNA | upstream | 37161 | 11597500 ~ 11655031 (-) | False | XLOC_037673 |
| TCONS_00073977 | mRNA | upstream | 104458 | 11664797 ~ 11676491 (-) | True | XLOC_037674 |
| TCONS_00073980 | mRNA | upstream | 346431 | 11906770 ~ 12034444 (-) | True | XLOC_037676 |
| TCONS_00073981 | mRNA | upstream | 699130 | 12259469 ~ 12269966 (-) | False | XLOC_037678 |
| TCONS_00073967 | other | downstream | 5502 | 11551604 ~ 11551704 (-) | True | XLOC_037669 |
| TCONS_00073965 | other | downstream | 6809 | 11548772 ~ 11550397 (-) | False | XLOC_037669 |
| TCONS_00073961 | other | downstream | 710657 | 10845918 ~ 10846549 (-) | True | XLOC_037667 |
| TCONS_00073935 | other | downstream | 1751887 | 9743559 ~ 9805319 (-) | False | XLOC_037657 |
| TCONS_00073973 | other | upstream | 11634 | 11571973 ~ 11572055 (-) | True | XLOC_037671 |
| TCONS_00073978 | other | upstream | 262040 | 11822379 ~ 11855305 (-) | True | XLOC_037675 |
| TCONS_00073998 | other | upstream | 1021927 | 12582266 ~ 12594717 (-) | False | XLOC_037682 |
| TCONS_00073999 | other | upstream | 1024304 | 12584643 ~ 12594723 (-) | False | XLOC_037682 |
| TCONS_00074000 | other | upstream | 1024564 | 12584903 ~ 12594705 (-) | False | XLOC_037682 |
