Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00073998 |
| length | 712 |
| RNA type | processed_transcript |
| GC content | 0.51 |
| exon number | 5 |
| gene id | XLOC_037682 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007120.7 |
| NCBI id | CM002893.2 |
| chromosome length | 56459846 |
| location | 12579077 ~ 12595003 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0048026 | positive regulation of mRNA splicing, via spliceosome | biological_process |
| GO:0005681 | spliceosomal complex | cellular_component |
| GO:0003676 | nucleic acid binding | molecular_function |
| GO:0003723 | RNA binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-040426-1094 | Predicted to enable RNA binding activity. Predicted to be involved in positive regulation of mRNA splicing, via spliceosome. Predicted to be part of spliceosomal complex. Is expressed in brain. Orthologous to human TRA2B (transformer 2 beta homolog). |
| ensembl_id | ENSDART00000132331 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00075305 | lncRNA | downstream | 180468 | 12352152 ~ 12401798 (-) | True | XLOC_037678 |
| TCONS_00075304 | lncRNA | downstream | 410481 | 12163937 ~ 12171785 (-) | True | XLOC_037677 |
| TCONS_00075303 | lncRNA | downstream | 410484 | 12076843 ~ 12171782 (-) | False | XLOC_037677 |
| TCONS_00075302 | lncRNA | downstream | 410491 | 12076843 ~ 12171775 (-) | False | XLOC_037677 |
| TCONS_00074963 | lncRNA | downstream | 410497 | 12143069 ~ 12171769 (-) | False | XLOC_037677 |
| TCONS_00074006 | lncRNA | upstream | 60588 | 12655305 ~ 12656425 (-) | True | XLOC_037685 |
| TCONS_00074010 | lncRNA | upstream | 132469 | 12727186 ~ 12736053 (-) | False | XLOC_037686 |
| TCONS_00075306 | lncRNA | upstream | 295181 | 12889898 ~ 12902782 (-) | False | XLOC_037688 |
| TCONS_00075307 | lncRNA | upstream | 304451 | 12899168 ~ 12903013 (-) | True | XLOC_037688 |
| TCONS_00075308 | lncRNA | upstream | 350840 | 12945557 ~ 12948957 (-) | True | XLOC_037689 |
| TCONS_00073993 | mRNA | downstream | 6490 | 12469147 ~ 12575776 (-) | False | XLOC_037681 |
| TCONS_00073995 | mRNA | downstream | 6490 | 12476696 ~ 12575776 (-) | True | XLOC_037681 |
| TCONS_00073991 | mRNA | downstream | 6697 | 12468635 ~ 12575569 (-) | False | XLOC_037681 |
| TCONS_00073992 | mRNA | downstream | 7793 | 12469147 ~ 12574473 (-) | False | XLOC_037681 |
| TCONS_00073994 | mRNA | downstream | 7793 | 12476696 ~ 12574473 (-) | False | XLOC_037681 |
| TCONS_00074002 | mRNA | upstream | 1321 | 12596038 ~ 12625385 (-) | False | XLOC_037683 |
| TCONS_00074003 | mRNA | upstream | 3364 | 12598081 ~ 12624622 (-) | True | XLOC_037683 |
| TCONS_00074004 | mRNA | upstream | 53988 | 12648705 ~ 12652984 (-) | True | XLOC_037684 |
| TCONS_00074005 | mRNA | upstream | 60561 | 12655278 ~ 12659140 (-) | False | XLOC_037685 |
| TCONS_00074007 | mRNA | upstream | 69656 | 12664373 ~ 12682848 (-) | False | XLOC_037686 |
| TCONS_00073978 | other | downstream | 726961 | 11822379 ~ 11855305 (-) | True | XLOC_037675 |
| TCONS_00073973 | other | downstream | 1010211 | 11571973 ~ 11572055 (-) | True | XLOC_037671 |
| TCONS_00073967 | other | downstream | 1030562 | 11551604 ~ 11551704 (-) | True | XLOC_037669 |
| TCONS_00073965 | other | downstream | 1031869 | 11548772 ~ 11550397 (-) | False | XLOC_037669 |
| TCONS_00073961 | other | downstream | 1735717 | 10845918 ~ 10846549 (-) | True | XLOC_037667 |
| TCONS_00074018 | other | upstream | 291035 | 12885752 ~ 12887858 (-) | True | XLOC_037687 |
| TCONS_00074026 | other | upstream | 1245025 | 13839742 ~ 13853399 (-) | True | XLOC_037696 |
| TCONS_00074033 | other | upstream | 1498524 | 14093241 ~ 14108880 (-) | True | XLOC_037700 |
| TCONS_00074049 | other | upstream | 2975626 | 15570343 ~ 15572163 (-) | True | XLOC_037710 |
| TCONS_00074050 | other | upstream | 3091029 | 15685746 ~ 15689059 (-) | True | XLOC_037711 |
