RNA id: TU91690


Basic Information

Item Value
RNA id TU91690
length 440
lncRNA type inter_gene
GC content 0.48
exon number 2
gene id G68555
representative True

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 42716044 ~ 42786638 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

Gtggctgcccgcatccgcttcaagacactagtacttacatacagggccatgaacggatcagccccagcttacatccaggacatggtcaaaccatataccccaacccgcccacttcgctctgcatcagccaaactgcttgctgcccccccacagcgagggagaactaatcactcaaccaaatccagactgttcactgtcctggctcccaaatggtggaatgagctcccaccgacatcaggatggctgaaagcatgtcttatattttggattcttcaaagtagccaccctttgctttttttgataactctgcaaacccttggtgttctctcaatgagcttcatgaggtagtcacctgaaatggttttaccttcacaggtgtgctttgtcagggttcattagtggaattatgtcccttattaataaaaaaagcaaagggtggc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU91671 lncRNA upstream 17145 42682294 ~ 42698899 (+) False G68544
TU91670 lncRNA upstream 17145 42696160 ~ 42698899 (+) True G68544
TU91663 lncRNA upstream 71967 42643856 ~ 42644077 (+) True G68537
TU91534 lncRNA upstream 108427 42569512 ~ 42607617 (+) True G68461
TU91636 lncRNA upstream 179398 42535267 ~ 42536646 (+) True G68512
TU91684 lncRNA downstream 7982 42794620 ~ 42801843 (+) True G68552
XR_005639460.1 lncRNA downstream 63108 42849746 ~ 42851808 (+) True LOC120560254
TU91735 lncRNA downstream 154854 42941492 ~ 42941699 (+) True G68594
TU91736 lncRNA downstream 155279 42941917 ~ 42942116 (+) True G68595
TU91754 lncRNA downstream 177656 42964294 ~ 43023819 (+) False G68598
XM_039802507.1 mRNA upstream 60110 42644746 ~ 42655934 (+) True LOC120560229
XM_039802449.1 mRNA upstream 72983 42550273 ~ 42643061 (+) False LOC120560195
XM_039804066.1 mRNA downstream 207285 42993923 ~ 42998383 (+) False LOC120561116
XM_039802505.1 mRNA downstream 238627 43025265 ~ 43038474 (+) True entr1
XM_039802506.1 mRNA downstream 238629 43025267 ~ 43038473 (+) False entr1
XM_039804072.1 mRNA downstream 596979 43383617 ~ 43403660 (+) False fhip2b
XM_039804073.1 mRNA downstream 646132 43432770 ~ 43452377 (+) True LOC120561123
TU91611 other upstream 319401 42322473 ~ 42396643 (+) True G68504
TU91472 other upstream 710083 41909824 ~ 42005961 (+) True G68429
TU91474 other upstream 781728 41932563 ~ 41934316 (+) False LOC120561105
TU91478 other upstream 781728 41932563 ~ 41934316 (+) False LOC120561105
TU91431 other upstream 959916 41721013 ~ 41756128 (+) False aebp1b
TU91750 other downstream 177402 42964040 ~ 42965620 (+) False G68598
TU91748 other downstream 189508 42976146 ~ 42998262 (+) True LOC120561116
TU91740 other downstream 207140 42993778 ~ 42998262 (+) False LOC120561116
TU91783 other downstream 238660 43025298 ~ 43031225 (+) False entr1
TU91794 other downstream 249699 43036337 ~ 43162404 (+) True G68626

Expression Profile