Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039802386.1 |
| length | 1110 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 8 |
| gene id | LOC120560164 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053117.1 |
| NCBI id | CM020914.1 |
| chromosome length | 43979800 |
| location | 37708211 ~ 37717629 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0006468 | protein phosphorylation | biological_process |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004692 | cGMP-dependent protein kinase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU90396 | lncRNA | upstream | 753 | 37700514 ~ 37707458 (+) | True | G67628 |
| TU90322 | lncRNA | upstream | 131247 | 37575516 ~ 37576964 (+) | True | G67572 |
| TU90315 | lncRNA | upstream | 160987 | 37545912 ~ 37547224 (+) | True | G67570 |
| TU90312 | lncRNA | upstream | 203483 | 37502702 ~ 37504728 (+) | True | G67568 |
| TU90307 | lncRNA | upstream | 229343 | 37478139 ~ 37478868 (+) | True | G67563 |
| TU90417 | lncRNA | downstream | 50861 | 37768490 ~ 37781260 (+) | True | G67639 |
| TU90421 | lncRNA | downstream | 66045 | 37783674 ~ 37807644 (+) | True | G67643 |
| TU90440 | lncRNA | downstream | 105442 | 37823071 ~ 37823369 (+) | True | G67661 |
| TU90445 | lncRNA | downstream | 196004 | 37913633 ~ 37914035 (+) | True | G67666 |
| TU90449 | lncRNA | downstream | 204095 | 37921724 ~ 37936859 (+) | True | G67669 |
| XM_039804255.1 | mRNA | upstream | 56306 | 37585850 ~ 37651905 (+) | True | bmp1a |
| XM_039804247.1 | mRNA | upstream | 132754 | 37556767 ~ 37575457 (+) | False | kansl3 |
| XM_039804242.1 | mRNA | upstream | 132755 | 37553378 ~ 37575456 (+) | False | kansl3 |
| XM_039802388.1 | mRNA | downstream | 274 | 37717903 ~ 37728705 (+) | False | LOC120560165 |
| XM_039804207.1 | mRNA | downstream | 12197 | 37729826 ~ 37762215 (+) | True | acsl2 |
| XM_039804208.1 | mRNA | downstream | 26571 | 37744200 ~ 37762215 (+) | False | acsl2 |
| XM_039804560.1 | mRNA | downstream | 223290 | 37940919 ~ 37950699 (+) | False | ido1 |
| XM_039804559.1 | mRNA | downstream | 223291 | 37940920 ~ 37950699 (+) | True | ido1 |
| TU89972 | other | upstream | 1226918 | 36478252 ~ 36481293 (+) | False | LOC120560081 |
| unassigned_transcript_269 | other | upstream | 1531660 | 36176479 ~ 36176551 (+) | True | trnaf-gaa_4 |
| unassigned_transcript_268 | other | upstream | 1546740 | 36161398 ~ 36161471 (+) | True | trnai-aau_2 |
| TU89790 | other | upstream | 1684947 | 35871423 ~ 36023264 (+) | False | G67152 |
| TU90405 | other | downstream | 5632 | 37723261 ~ 37728658 (+) | True | LOC120560165 |
| TU90566 | other | downstream | 643843 | 38361472 ~ 38407523 (+) | False | nkx6.3 |
| unassigned_transcript_271 | other | downstream | 713963 | 38431592 ~ 38431664 (+) | True | trnaf-gaa_6 |
| TU90637 | other | downstream | 878182 | 38595811 ~ 38598473 (+) | False | G67824 |
| TU90882 | other | downstream | 1692609 | 39410238 ~ 39413981 (+) | True | G68023 |
