Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU192798 |
| length | 210 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G162812 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047604.1 |
| NCBI id | CM018550.1 |
| chromosome length | 29376037 |
| location | 10254004 ~ 10254213 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU192507 | lncRNA | downstream | 403675 | 9843776 ~ 9850329 (-) | True | G162548 |
| TU192503 | lncRNA | downstream | 429255 | 9824614 ~ 9824749 (-) | True | G162545 |
| TU192470 | lncRNA | downstream | 632319 | 9621382 ~ 9621685 (-) | True | G162514 |
| XR_004578962.1 | lncRNA | downstream | 665702 | 9586707 ~ 9588302 (-) | True | LOC117598277 |
| TU192446 | lncRNA | downstream | 704424 | 9549342 ~ 9549580 (-) | True | G162497 |
| TU192806 | lncRNA | upstream | 5239 | 10259452 ~ 10261141 (-) | False | acyp1 |
| TU192812 | lncRNA | upstream | 8230 | 10262443 ~ 10264117 (-) | True | G162818 |
| XR_004578983.1 | lncRNA | upstream | 37436 | 10291649 ~ 10293566 (-) | False | LOC117598311 |
| XR_004578982.1 | lncRNA | upstream | 37436 | 10291649 ~ 10293566 (-) | True | LOC117598311 |
| TU193105 | lncRNA | upstream | 351844 | 10606057 ~ 10606812 (-) | True | G163083 |
| XM_026934310.2 | mRNA | downstream | 3248 | 10247906 ~ 10250756 (-) | True | fosaa |
| XM_026933715.2 | mRNA | downstream | 6856 | 10233971 ~ 10247148 (-) | False | jdp2a |
| XM_026933714.2 | mRNA | downstream | 17243 | 10233971 ~ 10236761 (-) | True | jdp2a |
| XM_026933709.2 | mRNA | downstream | 23303 | 10214843 ~ 10230701 (-) | True | flvcr2a |
| XM_026934367.2 | mRNA | downstream | 46210 | 10126333 ~ 10207794 (-) | False | ttll5 |
| XM_026933932.2 | mRNA | upstream | 5236 | 10259449 ~ 10261465 (-) | True | acyp1 |
| XM_026933931.2 | mRNA | upstream | 5236 | 10259449 ~ 10261370 (-) | False | acyp1 |
| XM_034308007.1 | mRNA | upstream | 11827 | 10266040 ~ 10278669 (-) | True | LOC113538853 |
| XM_026933741.2 | mRNA | upstream | 25980 | 10280193 ~ 10289157 (-) | True | ndc80 |
| XM_034308223.1 | mRNA | upstream | 25980 | 10280193 ~ 10287913 (-) | False | ndc80 |
| trnal-aag_1 | other | downstream | 44374 | 10209549 ~ 10209630 (-) | True | trnal-aag_1 |
| trnal-aag | other | downstream | 45796 | 10208127 ~ 10208208 (-) | True | trnal-aag |
| trnas-aga_11 | other | downstream | 625530 | 9628393 ~ 9628474 (-) | True | trnas-aga_11 |
| XR_004578987.1 | other | downstream | 737553 | 9491217 ~ 9516451 (-) | False | LOC113538771 |
| LOC113545095 | other | downstream | 1188726 | 9060569 ~ 9065278 (-) | True | LOC113545095 |
| TU192804 | other | upstream | 5239 | 10259452 ~ 10261141 (-) | False | acyp1 |
| TU192807 | other | upstream | 5239 | 10259452 ~ 10261178 (-) | False | acyp1 |
| TU192936 | other | upstream | 149872 | 10404085 ~ 10415002 (-) | False | LOC113538721 |
| TU192978 | other | upstream | 217773 | 10471986 ~ 10473982 (-) | False | fam98b |
| TU193430 | other | upstream | 944924 | 11199137 ~ 11216157 (-) | False | bmp4 |
