Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU192807 |
| length | 809 |
| RNA type | TUCP |
| GC content | 0.43 |
| exon number | 2 |
| gene id | acyp1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047604.1 |
| NCBI id | CM018550.1 |
| chromosome length | 29376037 |
| location | 10259449 ~ 10261465 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU192798 | lncRNA | downstream | 5239 | 10254004 ~ 10254213 (-) | True | G162812 |
| TU192507 | lncRNA | downstream | 409123 | 9843776 ~ 9850329 (-) | True | G162548 |
| TU192503 | lncRNA | downstream | 434703 | 9824614 ~ 9824749 (-) | True | G162545 |
| TU192470 | lncRNA | downstream | 637767 | 9621382 ~ 9621685 (-) | True | G162514 |
| XR_004578962.1 | lncRNA | downstream | 671150 | 9586707 ~ 9588302 (-) | True | LOC117598277 |
| TU192812 | lncRNA | upstream | 1265 | 10262443 ~ 10264117 (-) | True | G162818 |
| XR_004578983.1 | lncRNA | upstream | 30471 | 10291649 ~ 10293566 (-) | False | LOC117598311 |
| XR_004578982.1 | lncRNA | upstream | 30471 | 10291649 ~ 10293566 (-) | True | LOC117598311 |
| TU193105 | lncRNA | upstream | 344879 | 10606057 ~ 10606812 (-) | True | G163083 |
| XR_004579009.1 | lncRNA | upstream | 422880 | 10684058 ~ 10685169 (-) | True | LOC117598339 |
| XM_026934310.2 | mRNA | downstream | 8696 | 10247906 ~ 10250756 (-) | True | fosaa |
| XM_026933715.2 | mRNA | downstream | 12304 | 10233971 ~ 10247148 (-) | False | jdp2a |
| XM_026933714.2 | mRNA | downstream | 22691 | 10233971 ~ 10236761 (-) | True | jdp2a |
| XM_026933709.2 | mRNA | downstream | 28751 | 10214843 ~ 10230701 (-) | True | flvcr2a |
| XM_026934368.2 | mRNA | downstream | 51659 | 10141464 ~ 10207793 (-) | False | ttll5 |
| XM_034308007.1 | mRNA | upstream | 4862 | 10266040 ~ 10278669 (-) | True | LOC113538853 |
| XM_026933741.2 | mRNA | upstream | 19015 | 10280193 ~ 10289157 (-) | True | ndc80 |
| XM_034308223.1 | mRNA | upstream | 19015 | 10280193 ~ 10287913 (-) | False | ndc80 |
| XM_026933726.2 | mRNA | upstream | 50900 | 10312078 ~ 10320949 (-) | True | ttc8 |
| XM_034307936.1 | mRNA | upstream | 68506 | 10329684 ~ 10358737 (-) | False | LOC113538709 |
| trnal-aag_1 | other | downstream | 49822 | 10209549 ~ 10209630 (-) | True | trnal-aag_1 |
| trnal-aag | other | downstream | 51244 | 10208127 ~ 10208208 (-) | True | trnal-aag |
| trnas-aga_11 | other | downstream | 630978 | 9628393 ~ 9628474 (-) | True | trnas-aga_11 |
| XR_004578987.1 | other | downstream | 743001 | 9491217 ~ 9516451 (-) | False | LOC113538771 |
| LOC113545095 | other | downstream | 1194174 | 9060569 ~ 9065278 (-) | True | LOC113545095 |
| TU192936 | other | upstream | 142907 | 10404085 ~ 10415002 (-) | False | LOC113538721 |
| TU192978 | other | upstream | 210808 | 10471986 ~ 10473982 (-) | False | fam98b |
| TU193430 | other | upstream | 937959 | 11199137 ~ 11216157 (-) | False | bmp4 |
| trnay-gua_1 | other | upstream | 1013381 | 11274559 ~ 11274647 (-) | True | trnay-gua_1 |
| TU193515 | other | upstream | 1135004 | 11396182 ~ 11406751 (-) | True | LOC113538914 |
