Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU12191 |
| length | 431 |
| lncRNA type | inter_gene |
| GC content | 0.29 |
| exon number | 1 |
| gene id | G10275 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047595.1 |
| NCBI id | CM018541.1 |
| chromosome length | 35600603 |
| location | 18783017 ~ 18783447 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU12058 | lncRNA | downstream | 315081 | 18383588 ~ 18467936 (-) | False | sema6e |
| TU12067 | lncRNA | downstream | 368609 | 18413706 ~ 18414408 (-) | True | G10166 |
| TU12008 | lncRNA | downstream | 421987 | 18360807 ~ 18361030 (-) | True | G10124 |
| TU12005 | lncRNA | downstream | 427065 | 18354911 ~ 18355952 (-) | True | G10121 |
| TU11947 | lncRNA | downstream | 584671 | 18198127 ~ 18198346 (-) | True | G10083 |
| TU12238 | lncRNA | upstream | 56359 | 18839806 ~ 18840038 (-) | True | G10314 |
| TU12418 | lncRNA | upstream | 72078 | 18855525 ~ 18980359 (-) | True | G10461 |
| TU12420 | lncRNA | upstream | 97594 | 18881041 ~ 18888873 (-) | False | G10461 |
| TU12415 | lncRNA | upstream | 115975 | 18899422 ~ 18908394 (-) | True | G10460 |
| TU12449 | lncRNA | upstream | 213296 | 18996743 ~ 18998015 (-) | True | G10486 |
| XM_026926534.2 | mRNA | downstream | 22790 | 18756188 ~ 18760227 (-) | True | ctsk |
| XM_026926383.2 | mRNA | downstream | 31557 | 18742043 ~ 18751460 (-) | True | LOC113533916 |
| XM_026926457.2 | mRNA | downstream | 82012 | 18695036 ~ 18701005 (-) | True | ensab |
| XM_026926549.2 | mRNA | downstream | 89229 | 18691583 ~ 18693788 (-) | True | mcl1b |
| XM_026925942.2 | mRNA | downstream | 119386 | 18654139 ~ 18663631 (-) | True | tmod4 |
| XM_026926204.2 | mRNA | upstream | 41934 | 18825381 ~ 18832201 (-) | True | rrnad1 |
| XM_034309022.1 | mRNA | upstream | 43702 | 18827149 ~ 18832203 (-) | False | rrnad1 |
| XM_026926584.2 | mRNA | upstream | 74101 | 18857548 ~ 18860680 (-) | True | hapln2 |
| XM_026925950.2 | mRNA | upstream | 201331 | 18984778 ~ 18991821 (-) | False | nes |
| XM_026925949.2 | mRNA | upstream | 201331 | 18984778 ~ 18991821 (-) | True | nes |
| TU12167 | other | downstream | 82031 | 18695054 ~ 18700986 (-) | False | ensab |
| TU11919 | other | downstream | 586256 | 18188563 ~ 18196761 (-) | False | G10064 |
| TU11932 | other | downstream | 608451 | 18172187 ~ 18174566 (-) | True | G10068 |
| TU10747 | other | downstream | 2035466 | 16744702 ~ 16747551 (-) | True | id4 |
| XR_003403482.1 | other | downstream | 2282544 | 16498358 ~ 16500473 (-) | True | LOC113534214 |
| XR_004579128.1 | other | upstream | 43366 | 18826813 ~ 18832204 (-) | False | rrnad1 |
| TU12662 | other | upstream | 758952 | 19542399 ~ 19547243 (-) | False | ccn4b |
| trnaq-cug_1 | other | upstream | 893734 | 19677181 ~ 19677252 (-) | True | trnaq-cug_1 |
| trnaq-cug_2 | other | upstream | 896948 | 19680395 ~ 19680466 (-) | True | trnaq-cug_2 |
| trnaq-cug_3 | other | upstream | 900139 | 19683586 ~ 19683657 (-) | True | trnaq-cug_3 |
