Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU4556 |
| length | 353 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G3843 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047595.1 |
| NCBI id | CM018541.1 |
| chromosome length | 35600603 |
| location | 6882895 ~ 6883247 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU4553 | lncRNA | downstream | 23063 | 6859456 ~ 6859832 (-) | True | G3840 |
| TU4548 | lncRNA | downstream | 25312 | 6853115 ~ 6857583 (-) | True | G3835 |
| TU4545 | lncRNA | downstream | 30909 | 6849042 ~ 6851986 (-) | True | G3832 |
| TU4436 | lncRNA | downstream | 150778 | 6730782 ~ 6732117 (-) | True | G3730 |
| TU4385 | lncRNA | downstream | 220138 | 6662405 ~ 6662757 (-) | True | G3682 |
| TU4564 | lncRNA | upstream | 6514 | 6889761 ~ 6890053 (-) | True | G3851 |
| TU4549 | lncRNA | upstream | 9561 | 6892808 ~ 6894604 (-) | True | G3836 |
| TU4551 | lncRNA | upstream | 13595 | 6896842 ~ 6897767 (-) | True | G3838 |
| TU4550 | lncRNA | upstream | 20178 | 6903425 ~ 6903901 (-) | True | G3837 |
| TU4547 | lncRNA | upstream | 26815 | 6910062 ~ 6915567 (-) | True | G3834 |
| XM_034306160.1 | mRNA | downstream | 396285 | 6393785 ~ 6486610 (-) | True | scospondin |
| XM_026913593.2 | mRNA | downstream | 491506 | 6184134 ~ 6391389 (-) | True | kcnh2b |
| XM_034306610.1 | mRNA | downstream | 491526 | 6184134 ~ 6391369 (-) | False | kcnh2b |
| XM_026913588.2 | mRNA | downstream | 705868 | 6103706 ~ 6177027 (-) | False | LOC113526501 |
| XM_034305696.1 | mRNA | upstream | 98918 | 6982165 ~ 7028393 (-) | True | vopp1 |
| XM_026913995.2 | mRNA | upstream | 875137 | 7758384 ~ 7766765 (-) | True | napga |
| XM_026913505.2 | mRNA | upstream | 887412 | 7770659 ~ 7803866 (-) | True | si:dkey-192l18.9 |
| XM_026914317.2 | mRNA | upstream | 927108 | 7810355 ~ 7822642 (-) | False | zgc:111976 |
| XM_026914316.2 | mRNA | upstream | 927111 | 7810358 ~ 7822639 (-) | True | zgc:111976 |
| TU4104 | other | downstream | 492187 | 6271436 ~ 6390708 (-) | False | kcnh2b |
| TU4064 | other | downstream | 797239 | 6069359 ~ 6085656 (-) | True | G3420 |
| XR_003402769.2 | other | downstream | 1896185 | 4983218 ~ 4986710 (-) | False | LOC113526375 |
| TU3260 | other | downstream | 1977688 | 4900886 ~ 4905207 (-) | True | G2709 |
| XR_004579200.1 | other | downstream | 2047036 | 4832683 ~ 4835859 (-) | True | LOC113526482 |
| trnae-cuc_2 | other | upstream | 674502 | 7557749 ~ 7557820 (-) | True | trnae-cuc_2 |
| XR_004578678.1 | other | upstream | 1025085 | 7908332 ~ 7921917 (-) | False | fxyd6l |
| TU5508 | other | upstream | 1441335 | 8324582 ~ 8367964 (-) | True | G4658 |
| TU5903 | other | upstream | 2135160 | 9018407 ~ 9112988 (-) | True | G4948 |
| trnap-cgg | other | upstream | 2842003 | 9725250 ~ 9725321 (-) | True | trnap-cgg |
