Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU159169 |
| length | 795 |
| lncRNA type | inter_gene |
| GC content | 0.31 |
| exon number | 2 |
| gene id | G134719 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 18214721 ~ 18215570 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU159096 | lncRNA | downstream | 93107 | 18121347 ~ 18121614 (-) | True | G134654 |
| TU159095 | lncRNA | downstream | 93679 | 18120538 ~ 18121042 (-) | True | G134653 |
| TU159093 | lncRNA | downstream | 95264 | 18114209 ~ 18119457 (-) | True | G134651 |
| TU159075 | lncRNA | downstream | 150900 | 18047189 ~ 18063821 (-) | True | G134633 |
| XR_003403427.2 | lncRNA | downstream | 288520 | 17921834 ~ 17926201 (-) | True | LOC113533575 |
| XR_003403434.2 | lncRNA | upstream | 5566 | 18221136 ~ 18221839 (-) | True | LOC113533613 |
| TU159182 | lncRNA | upstream | 38015 | 18253585 ~ 18258714 (-) | True | dynll1 |
| TU159208 | lncRNA | upstream | 62970 | 18278540 ~ 18278767 (-) | True | G134748 |
| TU159398 | lncRNA | upstream | 83497 | 18299067 ~ 18299281 (-) | True | G134912 |
| XR_003403432.2 | lncRNA | upstream | 217152 | 18432722 ~ 18438804 (-) | True | LOC113533605 |
| XM_034306865.1 | mRNA | downstream | 79480 | 18133140 ~ 18135241 (-) | True | LOC113533608 |
| XM_026925862.2 | mRNA | downstream | 79486 | 18133140 ~ 18135235 (-) | False | LOC113533608 |
| XM_026925785.2 | mRNA | downstream | 130232 | 18048748 ~ 18084489 (-) | False | ikbkb |
| XM_034306554.1 | mRNA | downstream | 130232 | 18048748 ~ 18084489 (-) | True | ikbkb |
| XM_026925787.2 | mRNA | downstream | 207381 | 17947066 ~ 18007340 (-) | True | si:dkeyp-117b11.1 |
| XM_026925388.2 | mRNA | upstream | 19544 | 18235114 ~ 18240662 (-) | False | mrpl40 |
| XM_026925387.2 | mRNA | upstream | 19544 | 18235114 ~ 18240654 (-) | True | mrpl40 |
| XM_026924974.2 | mRNA | upstream | 44013 | 18259583 ~ 18261946 (-) | False | dynll1 |
| XM_026925073.2 | mRNA | upstream | 108123 | 18323693 ~ 18395412 (-) | False | gapvd1 |
| XM_026925071.2 | mRNA | upstream | 108123 | 18323693 ~ 18395412 (-) | False | gapvd1 |
| TU159072 | other | downstream | 130238 | 18067256 ~ 18084483 (-) | False | ikbkb |
| XR_004578582.1 | other | downstream | 2115487 | 16096632 ~ 16099234 (-) | False | rnf165b |
| TU157827 | other | downstream | 2262042 | 15950325 ~ 15952679 (-) | False | ccl27a |
| trnad-guc_2 | other | downstream | 2879054 | 15335596 ~ 15335667 (-) | True | trnad-guc_2 |
| TU157316 | other | downstream | 3034597 | 15177789 ~ 15180124 (-) | False | LOC113532496 |
| TU159186 | other | upstream | 38015 | 18253585 ~ 18262218 (-) | False | dynll1 |
| TU159181 | other | upstream | 44015 | 18259585 ~ 18261956 (-) | False | dynll1 |
| TU160210 | other | upstream | 1775293 | 19990863 ~ 19993744 (-) | False | LOC113533329 |
| TU160320 | other | upstream | 1824727 | 20040297 ~ 20040688 (-) | True | G135737 |
| trnat-cgu_2 | other | upstream | 1825310 | 20040880 ~ 20040951 (-) | True | trnat-cgu_2 |
